RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 RPL7AP62424 266 aaKnown RBP14.46□□□□□ -0.09
PTPN1-202ENST00000541713 HOOK3Q86VS8 718 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 IFT74Q96LB3 600 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 KLF6Q99612 283 aaPredicted RBP14.46□□□□□ -0.09
PTPN1-202ENST00000541713 PXMP2Q9NR77 195 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 ADAM22Q9P0K1 906 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 ZNF148Q9UQR1 794 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 SYNGAP1Q96PV0 1343 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 A0A0A6YYK5 440 aaPredicted RBP14.46□□□□□ -0.09
PTPN1-202ENST00000541713 PTGIRP43119 386 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 TAS2R40P59535 323 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 TMED2Q15363 201 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 MCF2L2Q86YR7 1114 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 MICALL2Q8IY33 904 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 SUPT20HQ8NEM7 779 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 OR5B17Q8NGF7 314 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 HELQQ8TDG4 1101 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 KIFAP3Q92845 792 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 TACO1Q9BSH4 297 aaKnown RBP14.46□□□□□ -0.09
PTPN1-202ENST00000541713 TAOK3Q9H2K8 898 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 C12orf65Q9H3J6 166 aaKnown RBP14.46□□□□□ -0.09
PTPN1-202ENST00000541713 ZWILCHQ9H900 591 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 PFASO15067 1338 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 PTGER2P43116 358 aa14.46□□□□□ -0.1
PTPN1-202ENST00000541713 TFAMQ00059 246 aaKnown RBP14.46□□□□□ -0.1
PTPN1-202ENST00000541713 CIAPIN1Q6FI81 312 aa14.46□□□□□ -0.1
PTPN1-202ENST00000541713 ARHGAP27Q6ZUM4 889 aa14.46□□□□□ -0.1
PTPN1-202ENST00000541713 ANKMY2Q8IV38 441 aa14.46□□□□□ -0.1
PTPN1-202ENST00000541713 FAM71AQ8IYT1 594 aa14.46□□□□□ -0.1
PTPN1-202ENST00000541713 ANKRD35Q8N283 1001 aa14.46□□□□□ -0.1
PTPN1-202ENST00000541713 EPB41L4BQ9H329 900 aa14.46□□□□□ -0.1
PTPN1-202ENST00000541713 KIF9Q9HAQ2 790 aa14.46□□□□□ -0.1
PTPN1-202ENST00000541713 ANAPC5Q9UJX4 755 aa14.46□□□□□ -0.1
PTPN1-202ENST00000541713 PASKQ96RG2 1323 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 F5H423 210 aaPredicted RBP14.45□□□□□ -0.1
PTPN1-202ENST00000541713 GOLGA8RI6L899 631 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 TNFSF9P41273 254 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 PEX5P50542 639 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 TRAF1Q13077 416 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 DEPTORQ8TB45 409 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 TRAPPC12Q8WVT3 735 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 HVCN1Q96D96 273 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 CHMP6Q96FZ7 201 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 ZNRF3Q9ULT6 936 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 TRIM33Q9UPN9 1127 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 STK24Q9Y6E0 443 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 BTNL10A8MVZ5 291 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 K7ERI5 159 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 CHRNA3P32297 505 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 CDR2Q01850 454 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 STRN3Q13033 797 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 DCUN1D2Q6PH85 259 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 SYT11Q9BT88 431 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 PCSK1NQ9UHG2 260 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 HACL1Q9UJ83 578 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 TLR3O15455 904 aaKnown RBP14.45□□□□□ -0.1
PTPN1-202ENST00000541713 ATF2P15336 505 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 ANKS1BQ7Z6G8 1248 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 CYP4X1Q8N118 509 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 C4orf33Q8N1A6 199 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 VPS37BQ9H9H4 285 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 SLC40A1Q9NP59 571 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 ABCF3Q9NUQ8 709 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 EXOC7Q9UPT5 735 aa14.45□□□□□ -0.1
PTPN1-202ENST00000541713 NCANO14594 1321 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 TMEM120BA0PK00 339 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 RIPK2O43353 540 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 BRD2P25440 801 aaKnown RBP14.44□□□□□ -0.1
PTPN1-202ENST00000541713 CTNNA2P26232 953 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 DSG3P32926 999 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 ACTR2P61160 394 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 SP2Q02086 613 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 CYP24A1Q07973 514 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 TXNRD3NBQ6F5E7 133 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 MSTO1Q9BUK6 570 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 MOV10L1Q9BXT6 1211 aaKnown RBP14.44□□□□□ -0.1
PTPN1-202ENST00000541713 R3HDMLQ9H3Y0 253 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 PICK1Q9NRD5 415 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 TBC1D22BQ9NU19 505 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 SAMD15Q9P1V8 674 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 INTUQ9ULD6 942 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 NENFQ9UMX5 172 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 UBIAD1Q9Y5Z9 338 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 CDC25CP30307 473 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 GTF2BQ00403 316 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 FOXR2Q6PJQ5 311 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 LRIG3Q6UXM1 1119 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 GPD1LQ8N335 351 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 SPOCK2Q92563 424 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 SLC38A10Q9HBR0 1119 aa14.44□□□□□ -0.1
PTPN1-202ENST00000541713 RBAKQ9NYW8 714 aaPredicted RBP14.44□□□□□ -0.1
PTPN1-202ENST00000541713 AGO2Q9UKV8 859 aaKnown RBP14.44□□□□□ -0.1
PTPN1-202ENST00000541713 VWA5AO00534 786 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 GNA15P30679 374 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 RDXP35241 583 aaKnown RBP14.43□□□□□ -0.1
PTPN1-202ENST00000541713 HSD17B4P51659 736 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 NOP14P78316 857 aaKnown RBP14.43□□□□□ -0.1
PTPN1-202ENST00000541713 CD302Q8IX05 232 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 SHC3Q92529 594 aa14.43□□□□□ -0.1
PTPN1-202ENST00000541713 FHDC1Q9C0D6 1143 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms