RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 EIF4BP23588 611 aaKnown RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 GTF2A1P52655 376 aaPredicted RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 JAM2P57087 298 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 OSTNP61366 133 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 CYP27A1Q02318 531 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 ASIC2Q16515 512 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 TDRD12Q587J7 1177 aaKnown RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 GDF6Q6KF10 455 aaPredicted RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 C15orf39Q6ZRI6 1047 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 IRF2BP2Q7Z5L9 587 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 CEP120Q8N960 986 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 STK33Q9BYT3 514 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 IRX2Q9BZI1 471 aaPredicted RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 DEF6Q9H4E7 631 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 RAB20Q9NX57 234 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 PTPRJQ12913 1337 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 CABYRO75952 493 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 SERPING1P05155 500 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 ARHGAP25P42331 645 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 BIRC3Q13489 604 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 SURF1Q15526 300 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 ENOX2Q16206 610 aaKnown RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 ASTE1Q2TB18 679 aaPredicted RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 ZACNQ401N2 412 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 VTI1AQ96AJ9 217 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 ELMO3Q96BJ8 720 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 ADPGKQ9BRR6 497 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 UBE2TQ9NPD8 197 aaPredicted RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 LZTFL1Q9NQ48 299 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 GOLGA6L9A6NEM1 432 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 MYO1CO00159 1063 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 FANCGO15287 622 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 IPO7O95373 1038 aaKnown RBP9.36□□□□□ -0.91
THBS3-210ENST00000541576 C4BPAP04003 597 aaKnown RBP9.36□□□□□ -0.91
THBS3-210ENST00000541576 STAT1P42224 750 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 CRYBB1P53674 252 aaPredicted RBP9.36□□□□□ -0.91
THBS3-210ENST00000541576 DRAP1Q14919 205 aaPredicted RBP9.36□□□□□ -0.91
THBS3-210ENST00000541576 SNX17Q15036 470 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 RSPH3Q86UC2 560 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 SESTD1Q86VW0 696 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 WDR49Q8IV35 697 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 ARHGEF19Q8IW93 802 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 GPR88Q9GZN0 384 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 RPF1Q9H9Y2 349 aaKnown RBP9.36□□□□□ -0.91
THBS3-210ENST00000541576 SSU72P8A0A1W2PR75 194 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 RCCD1A6NED2 376 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 EIF3CLB5ME19 914 aaKnown RBP9.36□□□□□ -0.91
THBS3-210ENST00000541576 F8VZ95 297 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 CLTAP09496 248 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 STAG3L1P0CL83 205 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 ACLYP53396 1101 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 AP3M2P53677 418 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 KLHL30Q0D2K2 578 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 GPS2Q13227 327 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 KYAT1Q16773 422 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 ARHGAP44Q17R89 818 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 TDRD10Q5VZ19 366 aaKnown RBP9.36□□□□□ -0.91
THBS3-210ENST00000541576 LHX8Q68G74 356 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 SCARA3Q6AZY7 606 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 APBB1IPQ7Z5R6 666 aaPredicted RBP9.36□□□□□ -0.91
THBS3-210ENST00000541576 TMEM40Q8WWA1 233 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 NT5C1BQ96P26 610 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 EIF3CQ99613 913 aaKnown RBP9.36□□□□□ -0.91
THBS3-210ENST00000541576 TRIM10Q9UDY6 481 aa9.36□□□□□ -0.91
THBS3-210ENST00000541576 GRIN2DO15399 1336 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 MOXD2PA6NHM9 499 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 M0QZ92 97 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 AKR1B10O60218 316 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 CXCL8P10145 99 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 HSPA6P17066 643 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 HOXA11P31270 313 aaPredicted RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 PIK3CAP42336 1068 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 KIF11P52732 1056 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 ETF1P62495 437 aaKnown RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 MRPS6P82932 125 aaKnown RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 DCAF4L1Q3SXM0 396 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 SERINC5Q86VE9 423 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 FMNL3Q8IVF7 1028 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 TMEM192Q8IY95 271 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 PPM1KQ8N3J5 372 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 OR5B17Q8NGF7 314 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 SH3TC2Q8TF17 1288 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 KAT5Q92993 513 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 CELF4Q9BZC1 486 aaKnown RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 VPS18Q9P253 973 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 BZW2Q9Y6E2 419 aaKnown RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 ZC3H11AO75152 810 aaKnown RBP eCLIP9.35□□□□□ -0.91
THBS3-210ENST00000541576 IL18RAPO95256 599 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 HLA-DRAP01903 254 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 RPLP2P05387 115 aaKnown RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 FERP16591 822 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 SOX5P35711 763 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 KRT83P78385 493 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 ITGA7Q13683 1181 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 SMC1AQ14683 1233 aaKnown RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 PTGISQ16647 500 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 NOTUMQ6P988 496 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 GLT1D1Q96MS3 346 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms