RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 ITGB6P18564 788 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 SLC6A9P48067 706 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 MTNR1BP49286 362 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 SLC5A3P53794 718 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 FAPQ12884 760 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 SP140Q13342 867 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 AGAP9Q5VTM2 703 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 RNF219Q5W0B1 726 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-210ENST00000541488 EGFLAMQ63HQ2 1017 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 DDX42Q86XP3 938 aaKnown RBP eCLIP5.34□□□□□ -1.55
PRKDC-210ENST00000541488 MAPKAPK5Q8IW41 473 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 ARHGEF19Q8IW93 802 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 AMOTL1Q8IY63 956 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 CNTD1Q8N815 330 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 NRG4Q8WWG1 115 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 RNF31Q96EP0 1072 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 TMEM140Q9NV12 185 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 MOCS1Q9NZB8 636 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 SLC23A1Q9UHI7 598 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 USP25Q9UHP3 1055 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 INTUQ9ULD6 942 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 GPR45Q9Y5Y3 372 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 COL4A3Q01955 1670 aa5.34□□□□□ -1.56
PRKDC-210ENST00000541488 TCRBV7S2A1N4TA0A589 114 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 IGSF3O75054 1194 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 POMCP01189 267 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 HLA-DOAP06340 250 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 GUCY1A2P33402 732 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 IARSP41252 1262 aaKnown RBP5.33□□□□□ -1.56
PRKDC-210ENST00000541488 HSD11B2P80365 405 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 MRPS21P82921 87 aaKnown RBP5.33□□□□□ -1.56
PRKDC-210ENST00000541488 UBXN2BQ14CS0 331 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 ACAP2Q15057 778 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 PGM2L1Q6PCE3 622 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 RHOT2Q8IXI1 618 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 RHOT1Q8IXI2 618 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 SLC44A3Q8N4M1 653 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 ZGPATQ8N5A5 531 aaKnown RBP5.33□□□□□ -1.56
PRKDC-210ENST00000541488 RIOX1Q9H6W3 641 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 KLHL11Q9NVR0 708 aa5.33□□□□□ -1.56
PRKDC-210ENST00000541488 TESQ9UGI8 421 aaKnown RBP5.33□□□□□ -1.56
PRKDC-210ENST00000541488 KIAA0391O15091 583 aaKnown RBP5.32□□□□□ -1.56
PRKDC-210ENST00000541488 GPR32O75388 356 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 CDKL5O76039 1030 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 ENDOD1O94919 500 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 AGXTP21549 392 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 OCA2Q04671 838 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 KLF1Q13351 362 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-210ENST00000541488 ANO4Q32M45 955 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 OLFML1Q6UWY5 402 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 FUBP3Q96I24 572 aaKnown RBP eCLIP5.32□□□□□ -1.56
PRKDC-210ENST00000541488 ALOXE3Q9BYJ1 711 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 SLC5A4Q9NY91 659 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 DKK2Q9UBU2 259 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 PRKAB1Q9Y478 270 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 NOX1Q9Y5S8 564 aa5.32□□□□□ -1.56
PRKDC-210ENST00000541488 MYBBP1AQ9BQG0 1328 aaKnown RBP5.31□□□□□ -1.56
PRKDC-210ENST00000541488 A0A1B0GTW7 788 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 CDHR4A6H8M9 788 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 KIAA0355O15063 1070 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 RHOBTB3O94955 611 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 LMNAP02545 664 aaKnown RBP5.31□□□□□ -1.56
PRKDC-210ENST00000541488 AMY1AP04745 511 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 CFIP05156 583 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 FGFR4P22455 802 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 BMPR1AP36894 532 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 MXRA7P84157 204 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 MGAT2Q10469 447 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 FOXI1Q12951 378 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 FAM50AQ14320 339 aaKnown RBP5.31□□□□□ -1.56
PRKDC-210ENST00000541488 SPDYE7PQ495Y7 208 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 B3GNTL1Q67FW5 361 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-210ENST00000541488 DRC7Q8IY82 874 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 TMEM132CQ8N3T6 1108 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.31□□□□□ -1.56
PRKDC-210ENST00000541488 REXO4Q9GZR2 422 aaKnown RBP5.31□□□□□ -1.56
PRKDC-210ENST00000541488 GSTO2Q9H4Y5 243 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 MCM8Q9UJA3 840 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 MTO1Q9Y2Z2 717 aaKnown RBP5.31□□□□□ -1.56
PRKDC-210ENST00000541488 PCDHA13Q9Y5I0 950 aa5.31□□□□□ -1.56
PRKDC-210ENST00000541488 PHLDB1Q86UU1 1377 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 PIPSLA2A3N6 862 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 ERN1O75460 977 aaKnown RBP5.3□□□□□ -1.56
PRKDC-210ENST00000541488 GPANK1O95872 356 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 MYBL2P10244 700 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 DDCP20711 480 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 PTH2RP49190 550 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 EVA1CP58658 441 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 ABCB5Q2M3G0 1257 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 GPR149Q86SP6 731 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 MARS2Q96GW9 593 aaKnown RBP5.3□□□□□ -1.56
PRKDC-210ENST00000541488 C7orf25Q9BPX7 421 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 CCDC8Q9H0W5 538 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-210ENST00000541488 TOR3AQ9H497 397 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 SPC25Q9HBM1 224 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 MKS1Q9NXB0 559 aa5.3□□□□□ -1.56
PRKDC-210ENST00000541488 EPN1Q9Y6I3 576 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-210ENST00000541488 MARCH11A6NNE9 402 aa5.29□□□□□ -1.56
PRKDC-210ENST00000541488 XPOTO43592 962 aaKnown RBP5.29□□□□□ -1.56
PRKDC-210ENST00000541488 FOSP01100 380 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms