RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.34■□□□□ 0.051e-6■■■□□ 15.4
SFSWAP-210ENST00000541286 LXNQ9BS40 222 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 AMFRQ9UKV5 643 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 GPR25O00155 361 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 ZNF862O60290 1169 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 TRAF1Q13077 416 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 MAP2K5Q13163 448 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 EDRF1Q3B7T1 1238 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 GKAP1Q5VSY0 366 aaPredicted RBP15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 TAPT1Q6NXT6 567 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 GPRC5CQ9NQ84 441 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 GABBR1Q9UBS5 961 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 SMPD1P17405 629 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 MAPK4P31152 587 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 PLTPP55058 493 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 KCNJ2P63252 427 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 GHRHRQ02643 423 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 FRMD5Q7Z6J6 570 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 SLC35G2Q8TBE7 412 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 TAS2R14Q9NYV8 317 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 PNMA2Q9UL42 364 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 UTP11Q9Y3A2 253 aaKnown RBP15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 SZT2Q5T011 3432 aa15.34■□□□□ 0.05
SFSWAP-210ENST00000541286 MYADML2A6NDP7 307 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 EXOC3O60645 756 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 PGK1P00558 417 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 TNFAIP3P21580 790 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 EDNRBP24530 442 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 RPA1P27694 616 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 SLCO1A2P46721 670 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 ACTR2P61160 394 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 UAP1Q16222 522 aaPredicted RBP15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 ODR4Q5SWX8 454 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 SPATS2Q86XZ4 545 aaKnown RBP15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 SYT2Q8N9I0 419 aaPredicted RBP15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 MGARPQ8TDB4 240 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 LRRC45Q96CN5 670 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 HHIPL1Q96JK4 782 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 TEKT3Q9BXF9 490 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 ISCUQ9H1K1 167 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 TMBIM4Q9HC24 238 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 SNX24Q9Y343 169 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 TRAPPC3O43617 180 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 ZNF844Q08AG5 666 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 EPHA7Q15375 998 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 GNPTABQ3T906 1256 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 TLDC1Q6P9B6 456 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 MAMDC4Q6UXC1 1216 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 YTHDF3Q7Z739 585 aaKnown RBP15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 CCDC25Q86WR0 208 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 PALB2Q86YC2 1186 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 ARMC2Q8NEN0 867 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 AGAP11Q8TF27 550 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 AFG1LQ8WV93 481 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 PBKQ96KB5 322 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 JPH1Q9HDC5 661 aaPredicted RBP15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 TYW1Q9NV66 732 aaKnown RBP15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 FRMPD4Q14CM0 1322 aa15.33■□□□□ 0.04
SFSWAP-210ENST00000541286 SPATA31C2B4DYI2 1134 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 DYNC1LI2O43237 492 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 GJB1P08034 283 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 VIMP08670 466 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 CCND3P30281 292 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 HS2ST1Q7LGA3 356 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 FAM178BQ8IXR5 827 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 CCDC63Q8NA47 563 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 SLC17A8Q8NDX2 589 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 CCDC26Q8TAB7 109 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 EHMT1Q9H9B1 1298 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 TCEAL9Q9UHQ7 104 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 TRIM33Q9UPN9 1127 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 RBBP6Q7Z6E9 1792 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 TISP43B9A030 160 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 CCDC38Q502W7 563 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 BZW1Q7L1Q6 419 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 DNERQ8NFT8 737 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 KATNBL1Q9H079 304 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 CTTNBP2NLQ9P2B4 639 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 PTPN22Q9Y2R2 807 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 BZW2Q9Y6E2 419 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 IGSF9BQ9UPX0 1349 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 HMGB1P1B2RPK0 211 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 PDXKO00764 312 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 FARP2O94887 1054 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 IGBP1P78318 339 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 ADCY1Q08828 1119 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 CBWD6Q4V339 395 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 CBWD3Q5JTY5 395 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 CBWD5Q5RIA9 395 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 RINT1Q6NUQ1 792 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 SHCBP1Q8NEM2 672 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 SPATA33Q96N06 139 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 THAP2Q9H0W7 228 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 FRMD4BQ9Y2L6 1034 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 TRIM17Q9Y577 477 aa15.32■□□□□ 0.04
SFSWAP-210ENST00000541286 FOXO6A8MYZ6 492 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 ATMINO43313 823 aaPredicted RBP15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 ATP4AP20648 1035 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 ACVR2BQ13705 512 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms