RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 EHHADHQ08426 723 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 UPP1Q16831 310 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 KIAA0319Q5VV43 1072 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 PTCRAQ6ISU1 281 aaPredicted RBP14.3□□□□□ -0.12
LTBR-208ENST00000541005 AUTS2Q8WXX7 1259 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 STAMQ92783 540 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 DDX27Q96GQ7 796 aaKnown RBP14.3□□□□□ -0.12
LTBR-208ENST00000541005 TSPAN18Q96SJ8 248 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 MSTO1Q9BUK6 570 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 GPR62Q9BZJ7 368 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 MRPL17Q9NRX2 175 aaKnown RBP14.3□□□□□ -0.12
LTBR-208ENST00000541005 EXOC7Q9UPT5 735 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 FAM50BQ9Y247 325 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
LTBR-208ENST00000541005 DOCK8Q8NF50 2099 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 ANKRD63C9JTQ0 380 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 TADA2AO75478 443 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 C1RP00736 705 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 MYBP10242 640 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 MATR3P43243 847 aaKnown RBP eCLIP14.29□□□□□ -0.12
LTBR-208ENST00000541005 ASIC1P78348 528 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 RBM10P98175 930 aaKnown RBP14.29□□□□□ -0.12
LTBR-208ENST00000541005 ELAVL2Q12926 359 aaKnown RBP14.29□□□□□ -0.12
LTBR-208ENST00000541005 ENOX2Q16206 610 aaKnown RBP14.29□□□□□ -0.12
LTBR-208ENST00000541005 USP41Q3LFD5 358 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 SEZ6Q53EL9 994 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 ZBTB41Q5SVQ8 909 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 EP400NLQ6ZTU2 488 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 UNC13DQ70J99 1090 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 TAS1R1Q7RTX1 841 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 PPFIBP1Q86W92 1011 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 SLC22A17Q8WUG5 538 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 CASP10Q92851 521 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 ACCSQ96QU6 501 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 EMILIN2Q9BXX0 1053 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 FGFBP2Q9BYJ0 223 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 RXFP1Q9HBX9 757 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 TBC1D7Q9P0N9 293 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 CPSF3Q9UKF6 684 aaKnown RBP14.29□□□□□ -0.12
LTBR-208ENST00000541005 BARX2Q9UMQ3 279 aaPredicted RBP14.29□□□□□ -0.12
LTBR-208ENST00000541005 HCFC2Q9Y5Z7 792 aa14.29□□□□□ -0.12
LTBR-208ENST00000541005 A0A1B0GVL5 298 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 PVALEFA0A1B0GWK0 134 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 TISP43B9A030 160 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 DLL1O00548 723 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 EIF3DO15371 548 aaKnown RBP eCLIP14.28□□□□□ -0.12
LTBR-208ENST00000541005 MBTPS2O43462 519 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 UBE4BO95155 1302 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 MYL1P05976 194 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 CNPP09543 421 aaKnown RBP14.28□□□□□ -0.12
LTBR-208ENST00000541005 IL9P15248 144 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 HOXB8P17481 243 aaPredicted RBP14.28□□□□□ -0.12
LTBR-208ENST00000541005 ADSSP30520 456 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 RPL9P32969 192 aaKnown RBP14.28□□□□□ -0.12
LTBR-208ENST00000541005 TNFSF9P41273 254 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 CLCNKBP51801 687 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 CREMQ03060 361 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 PPP2R3AQ06190 1150 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 KCNA1Q09470 495 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 POSTNQ15063 836 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 SMAD2Q15796 467 aaKnown RBP14.28□□□□□ -0.12
LTBR-208ENST00000541005 ZBTB6Q15916 424 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 ANKRD54Q6NXT1 300 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 DCLRE1AQ6PJP8 1040 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 CD300LGQ6UXG3 332 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 STXBP4Q6ZWJ1 553 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 EPM2AIP1Q7L775 607 aaPredicted RBP14.28□□□□□ -0.12
LTBR-208ENST00000541005 CD302Q8IX05 232 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 CEP57L1Q8IYX8 460 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 RABGGTAQ92696 567 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 KLHL5Q96PQ7 755 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 UHRF1Q96T88 793 aaPredicted RBP14.28□□□□□ -0.12
LTBR-208ENST00000541005 TMEM206Q9H813 350 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 MYO10Q9HD67 2058 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.28□□□□□ -0.12
LTBR-208ENST00000541005 FNIP2Q9P278 1114 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 PRKAG3Q9UGI9 489 aa14.28□□□□□ -0.12
LTBR-208ENST00000541005 B3GAT3O94766 335 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 ADH1AP07327 375 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 CYP3A5P20815 502 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 GARTP22102 1010 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 FGFR3P22607 806 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 CLCN4P51793 760 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 FAM26FQ5R3K3 315 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 KIAA1841Q6NSI8 718 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 SYCE2Q6PIF2 218 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.27□□□□□ -0.13
LTBR-208ENST00000541005 C3orf58Q8NDZ4 430 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 PIK3R5Q8WYR1 880 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 SUSD6Q92537 303 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 C18orf25Q96B23 403 aaPredicted RBP14.27□□□□□ -0.13
LTBR-208ENST00000541005 TTPALQ9BTX7 342 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 S1PR5Q9H228 398 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 IKZF4Q9H2S9 585 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 RPF1Q9H9Y2 349 aaKnown RBP14.27□□□□□ -0.13
LTBR-208ENST00000541005 GOLGA2P5Q9HBQ8 144 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 DZANK1Q9NVP4 752 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 SERTAD1Q9UHV2 236 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 AGO2Q9UKV8 859 aaKnown RBP14.27□□□□□ -0.13
LTBR-208ENST00000541005 CIZ1Q9ULV3 898 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms