RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 TAF1BQ53T94 588 aaPredicted RBP15.07■□□□□ 0
COLCA1-204ENST00000540738 RAB42Q8N4Z0 105 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 CAPNS2Q96L46 248 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 A1CFQ9NQ94 594 aaKnown RBP15.07■□□□□ 0
COLCA1-204ENST00000540738 ABI2Q9NYB9 513 aaPredicted RBP15.07■□□□□ 0
COLCA1-204ENST00000540738 TRPV2Q9Y5S1 764 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 PI4K2BG5E9Z4 385 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 PODXLO00592 558 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 CA12O43570 354 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 VTNP04004 478 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 MX2P20592 715 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 ATP11AP98196 1134 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 DR1Q01658 176 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 ANKRD23Q86SG2 305 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 ZNF410Q86VK4 478 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 ADSSL1Q8N142 457 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 VGLL2Q8N8G2 317 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 ASAP3Q8TDY4 903 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 EMILIN2Q9BXX0 1053 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 EPHB3P54753 998 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 RBBP5Q15291 538 aaKnown RBP15.06■□□□□ 0
COLCA1-204ENST00000540738 LY6KQ17RY6 165 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 CYP4F22Q6NT55 531 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 ITIH5Q86UX2 942 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 C17orf53Q8N3J3 647 aaPredicted RBP15.06■□□□□ 0
COLCA1-204ENST00000540738 PPFIBP2Q8ND30 876 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 NLGN2Q8NFZ4 835 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 DEPDC1BQ8WUY9 529 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 MKL1Q969V6 931 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 PPP1R13BQ96KQ4 1090 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 KLK14Q9P0G3 267 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 NAGPAQ9UK23 515 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 HPS5Q9UPZ3 1129 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 IPPQ9Y573 584 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 CYP26A1O43174 497 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 ARL4CP56559 192 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 PLD1Q13393 1074 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 CTXN3Q4LDR2 81 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 SARM1Q6SZW1 724 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 ANKS1AQ92625 1134 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 CCDC85CA6NKD9 419 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 TBKBP1A7MCY6 615 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 AP3B1O00203 1094 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 GARTP22102 1010 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 SLC1A1P43005 524 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 CDH6P55285 790 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 STX1BP61266 288 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 SLC30A10Q6XR72 485 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 MGARPQ8TDB4 240 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 PYROXD1Q8WU10 500 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 ABHD10Q9NUJ1 306 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 BFARQ9NZS9 450 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 DBR1Q9UK59 544 aaKnown RBP15.06■□□□□ 0
COLCA1-204ENST00000540738 KIAA1257Q9ULG3 409 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 SLC4A7Q9Y6M7 1214 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 SLIT3O75094 1523 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 RTN2O75298 545 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 CHEK2O96017 543 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 PRMT2P55345 433 aa15.06■□□□□ 0
COLCA1-204ENST00000540738 ZMYM2Q9UBW7 1377 aa15.05■□□□□ 0
COLCA1-204ENST00000540738 SLC37A4O43826 429 aa15.05■□□□□ 0
COLCA1-204ENST00000540738 PDGFRAP16234 1089 aa15.05■□□□□ 0
COLCA1-204ENST00000540738 ZC2HC1CQ53FD0 456 aaPredicted RBP15.05■□□□□ 0
COLCA1-204ENST00000540738 SPOPLQ6IQ16 392 aa15.05■□□□□ 0
COLCA1-204ENST00000540738 RNF10Q8N5U6 811 aaKnown RBP15.05■□□□□ 0
COLCA1-204ENST00000540738 PPP1R2P1Q96PQ5 205 aa15.05■□□□□ 0
COLCA1-204ENST00000540738 OSMRQ99650 979 aa15.05■□□□□ 0
COLCA1-204ENST00000540738 WNT8AQ9H1J5 351 aa15.05■□□□□ 0
COLCA1-204ENST00000540738 TTI1O43156 1089 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 ITGB3P05106 788 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 C10orf120Q5SQS8 335 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 RANBP17Q9H2T7 1088 aaKnown RBP15.05■□□□□ -0
COLCA1-204ENST00000540738 PCDHB2Q9Y5E7 798 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 SRGAP2O75044 1071 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 HMBSP08397 361 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 ADCY1Q08828 1119 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 GTF2H3Q13889 308 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 GPR142Q7Z601 462 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 CERS5Q8N5B7 392 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 RMDN1Q96DB5 314 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 MT-ND3P03897 115 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 DPYDQ12882 1025 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 GIMAP7Q8NHV1 300 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 KLRG1Q96E93 195 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 SENP7Q9BQF6 1050 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 CATSPERBQ9H7T0 1116 aa15.05■□□□□ -0
COLCA1-204ENST00000540738 SPDYE5A6NIY4 337 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 DFFAO00273 331 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 FGGP02679 453 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 SLC11A2P49281 568 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 RHBDL3P58872 404 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 AP1B1Q10567 949 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 FRA10AC1Q70Z53 315 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 ZNF677Q86XU0 584 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 CEP120Q8N960 986 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 CFAP36Q96G28 342 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 MUC3BQ9H195 1237 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 TRPM5Q9NZQ8 1165 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 A0A087WZ62 844 aa15.04■□□□□ -0
COLCA1-204ENST00000540738 GOLGA8KD6RF30 607 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms