RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 PPP4R3CPQ6ZMV5 832 aa14.31□□□□□ -0.12
UBC-207ENST00000540351 ASB16Q96NS5 453 aa14.31□□□□□ -0.12
UBC-207ENST00000540351 MTRQ99707 1265 aa14.31□□□□□ -0.12
UBC-207ENST00000540351 TMEM121BQ9BXQ6 578 aaPredicted RBP14.31□□□□□ -0.12
UBC-207ENST00000540351 SLC26A6Q9BXS9 759 aa14.31□□□□□ -0.12
UBC-207ENST00000540351 C22orf23Q9BZE7 217 aa14.31□□□□□ -0.12
UBC-207ENST00000540351 LMAN1LQ9HAT1 526 aa14.31□□□□□ -0.12
UBC-207ENST00000540351 NCOA5Q9HCD5 579 aaKnown RBP14.31□□□□□ -0.12
UBC-207ENST00000540351 ZNF334Q9HCZ1 680 aaPredicted RBP14.31□□□□□ -0.12
UBC-207ENST00000540351 ANGPTL2Q9UKU9 493 aa14.31□□□□□ -0.12
UBC-207ENST00000540351 NDRG2Q9UN36 371 aaKnown RBP14.31□□□□□ -0.12
UBC-207ENST00000540351 POLIQ9UNA4 740 aa14.31□□□□□ -0.12
UBC-207ENST00000540351 WASF3Q9UPY6 502 aa14.31□□□□□ -0.12
UBC-207ENST00000540351 MRPS23Q9Y3D9 190 aaKnown RBP14.31□□□□□ -0.12
UBC-207ENST00000540351 BACE2Q9Y5Z0 518 aa14.31□□□□□ -0.12
UBC-207ENST00000540351 FREM2Q5SZK8 3169 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 MAN2B1O00754 1011 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 MICAL2O94851 1124 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 ABLIM3O94929 683 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 SLITRK3O94933 977 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 LYPLA2O95372 231 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 EDN1P05305 212 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 HMGB1P09429 215 aaKnown RBP14.3□□□□□ -0.12
UBC-207ENST00000540351 PDIA3P30101 505 aaKnown RBP14.3□□□□□ -0.12
UBC-207ENST00000540351 CCR3P51677 355 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 INF2Q27J81 1249 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 PPP4R3AQ6IN85 833 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 VITQ6UXI7 678 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 BLIDQ8IZY5 108 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 DDX27Q96GQ7 796 aaKnown RBP14.3□□□□□ -0.12
UBC-207ENST00000540351 DYDC2Q96IM9 177 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 ZSWIM3Q96MP5 696 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 AIFM3Q96NN9 605 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 HSD17B14Q9BPX1 270 aa14.3□□□□□ -0.12
UBC-207ENST00000540351 WDR27A2RRH5 827 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 CHURC1-FNTBB4DL54 471 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 DKC1O60832 514 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBC-207ENST00000540351 HOXA6P31267 233 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 FNTBP49356 437 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 MLLT6P55198 1093 aaPredicted RBP14.29□□□□□ -0.12
UBC-207ENST00000540351 NLRP5P59047 1200 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 PTGDRQ13258 359 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 SIM2Q14190 667 aaPredicted RBP14.29□□□□□ -0.12
UBC-207ENST00000540351 CTTNQ14247 550 aaKnown RBP14.29□□□□□ -0.12
UBC-207ENST00000540351 KRT32Q14532 448 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 FAM187BQ17R55 369 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 XKR9Q5GH70 373 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 CDCA2Q69YH5 1023 aaPredicted RBP14.29□□□□□ -0.12
UBC-207ENST00000540351 SLC8B1Q6J4K2 584 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 CEP57Q86XR8 500 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 SPEM1Q8N4L4 309 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 C3orf58Q8NDZ4 430 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 FAM3CQ92520 227 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 RSPRY1Q96DX4 576 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 CHAMP1Q96JM3 812 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 FZD8Q9H461 694 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 ZSWIM4Q9H7M6 989 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 TRPV4Q9HBA0 871 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 PARP2Q9UGN5 583 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 CDY1Q9Y6F8 540 aa14.29□□□□□ -0.12
UBC-207ENST00000540351 TBX3O15119 743 aa14.28□□□□□ -0.12
UBC-207ENST00000540351 PROS1P07225 676 aa14.28□□□□□ -0.12
UBC-207ENST00000540351 TKTP29401 623 aaKnown RBP14.28□□□□□ -0.12
UBC-207ENST00000540351 CNR2P34972 360 aa14.28□□□□□ -0.12
UBC-207ENST00000540351 CXCL12P48061 93 aa14.28□□□□□ -0.12
UBC-207ENST00000540351 ELAVL2Q12926 359 aaKnown RBP14.28□□□□□ -0.12
UBC-207ENST00000540351 PDXDC1Q6P996 788 aa14.28□□□□□ -0.12
UBC-207ENST00000540351 PRR23BQ6ZRT6 265 aa14.28□□□□□ -0.12
UBC-207ENST00000540351 FAM160A2Q8N612 972 aaPredicted RBP14.28□□□□□ -0.12
UBC-207ENST00000540351 DDX1Q92499 740 aaKnown RBP14.28□□□□□ -0.12
UBC-207ENST00000540351 PPP1R10Q96QC0 940 aaKnown RBP14.28□□□□□ -0.12
UBC-207ENST00000540351 TRIM6Q9C030 488 aaPredicted RBP14.28□□□□□ -0.12
UBC-207ENST00000540351 PDZD7Q9H5P4 517 aa14.28□□□□□ -0.12
UBC-207ENST00000540351 RAB23Q9ULC3 237 aa14.28□□□□□ -0.12
UBC-207ENST00000540351 RECQL4O94761 1208 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 SEC24AO95486 1093 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 THP07101 528 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 RBM25P49756 843 aaKnown RBP14.27□□□□□ -0.13
UBC-207ENST00000540351 RARRES1P49788 294 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 EPHA5P54756 1037 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 ROR1Q01973 937 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 CYP4A11Q02928 519 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 MRPL58Q14197 206 aaKnown RBP14.27□□□□□ -0.13
UBC-207ENST00000540351 EARS2Q5JPH6 523 aaKnown RBP14.27□□□□□ -0.13
UBC-207ENST00000540351 PLA2G2CQ5R387 149 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 Q6ZS52 159 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 OTUD6AQ7L8S5 288 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 LONP2Q86WA8 852 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 HACE1Q8IYU2 909 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 FAM177A1Q8N128 213 aaPredicted RBP14.27□□□□□ -0.13
UBC-207ENST00000540351 ZNF461Q8TAF7 563 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 TRMT61BQ9BVS5 477 aaKnown RBP14.27□□□□□ -0.13
UBC-207ENST00000540351 ZFP14Q9HCL3 533 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 RBM12Q9NTZ6 932 aaKnown RBP14.27□□□□□ -0.13
UBC-207ENST00000540351 SNTG2Q9NY99 539 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 NAP1L2Q9ULW6 460 aaPredicted RBP14.27□□□□□ -0.13
UBC-207ENST00000540351 PIAS3Q9Y6X2 628 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 EML5Q05BV3 1969 aa14.27□□□□□ -0.13
UBC-207ENST00000540351 PDCD11Q14690 1871 aaKnown RBP14.27□□□□□ -0.13
UBC-207ENST00000540351 ITPR1Q14643 2758 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms