RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 MTX1Q13505 466 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 CAMK1Q14012 370 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 TRIM71Q2Q1W2 868 aaKnown RBP4.65□□□□□ -1.67
C2CD3-214ENST00000540057 CCDC184Q52MB2 194 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 ZNF618Q5T7W0 954 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 ZPBP2Q6X784 338 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 ADGRD2Q7Z7M1 963 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 SESTD1Q86VW0 696 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 SPPL2CQ8IUH8 684 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 DBF4BQ8NFT6 615 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 KCNG4Q8TDN1 519 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 SDR42E1Q8WUS8 393 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 SSH1Q8WYL5 1049 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 SUSD6Q92537 303 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 TOP1MTQ969P6 601 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 ZNF512BQ96KM6 892 aaPredicted RBP4.65□□□□□ -1.67
C2CD3-214ENST00000540057 MEIS3Q99687 375 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 WDR11Q9BZH6 1224 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 ANTXR1Q9H6X2 564 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 ACAD9Q9H845 621 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 BARX2Q9UMQ3 279 aaPredicted RBP4.65□□□□□ -1.67
C2CD3-214ENST00000540057 CTDP1Q9Y5B0 961 aaPredicted RBP4.65□□□□□ -1.67
C2CD3-214ENST00000540057 GREB1LQ9C091 1923 aaPredicted RBP4.65□□□□□ -1.67
C2CD3-214ENST00000540057 ACACBO00763 2458 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 MAP1BP46821 2468 aaKnown RBP4.65□□□□□ -1.67
C2CD3-214ENST00000540057 PKD1L2Q7Z442 2459 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 MYH4Q9Y623 1939 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 EP300Q09472 2414 aaPredicted RBP4.64□□□□□ -1.67
C2CD3-214ENST00000540057 CYP2D7A0A087X1C5 515 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 TEX51A0A1B0GUA7 166 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.64□□□□□ -1.67
C2CD3-214ENST00000540057 MEIS3P2A8K0S8 358 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 PI15O43692 258 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 NRDCO43847 1150 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 NUAK1O60285 661 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 MMP1P03956 469 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 ATF7P17544 494 aaPredicted RBP4.64□□□□□ -1.67
C2CD3-214ENST00000540057 BMPR1AP36894 532 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 CLCN5P51795 746 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 ANGPT1Q15389 498 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 BRDTQ58F21 947 aaPredicted RBP4.64□□□□□ -1.67
C2CD3-214ENST00000540057 TNNI3KQ59H18 835 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 MUM1L1Q5H9M0 696 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 CWF19L1Q69YN2 538 aaKnown RBP4.64□□□□□ -1.67
C2CD3-214ENST00000540057 C16orf86Q6ZW13 317 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 FIBCD1Q8N539 461 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 DCLK2Q8N568 766 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 ZNF655Q8N720 491 aaPredicted RBP4.64□□□□□ -1.67
C2CD3-214ENST00000540057 EFHBQ8N7U6 833 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 KREMEN2Q8NCW0 462 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 COPS5Q92905 334 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 C11orf84Q9BUA3 381 aaPredicted RBP4.64□□□□□ -1.67
C2CD3-214ENST00000540057 SGPP1Q9BX95 441 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 CRNKL1Q9BZJ0 848 aaKnown RBP4.64□□□□□ -1.67
C2CD3-214ENST00000540057 PRDM14Q9GZV8 571 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.64□□□□□ -1.67
C2CD3-214ENST00000540057 SEMA4AQ9H3S1 761 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 SMOC2Q9H3U7 446 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 GPR108Q9NPR9 543 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 RNF146Q9NTX7 359 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 CYP39A1Q9NYL5 469 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 UBP1Q9NZI7 540 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 TCFL5Q9UL49 500 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 HDAC5Q9UQL6 1122 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 FPGT-TNNI3KV9GXZ4 949 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 ZNF292O60281 2723 aa4.64□□□□□ -1.67
C2CD3-214ENST00000540057 FANCMQ8IYD8 2048 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 PNMA6EA0A0J9YXQ4 647 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 NKRFO15226 690 aaKnown RBP eCLIP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 SIGLEC6O43699 453 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 PRKAB2O43741 272 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 ADRB1P08588 477 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 INHBBP09529 407 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 ALAS1P13196 640 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 SP100P23497 879 aaPredicted RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 DNAJB1P25685 340 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 RPL10P27635 214 aaKnown RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 KIR2DL1P43626 348 aaPredicted RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 KIR2DL2P43627 348 aaPredicted RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 NRIP1P48552 1158 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 ALDH5A1P51649 535 aaPredicted RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 ATXN1P54253 815 aaKnown RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 RBM10P98175 930 aaKnown RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 G3BP1Q13283 466 aaKnown RBP eCLIP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 PPP2R5BQ15173 497 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 TKFCQ3LXA3 575 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 SEZ6Q53EL9 994 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 PLEKHG4Q58EX7 1191 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 C12orf60Q5U649 245 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 LILRA6Q6PI73 481 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 TMED8Q6PL24 325 aaPredicted RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 NLRC3Q7RTR2 1065 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 RBM23Q86U06 439 aaKnown RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 CCDC105Q8IYK2 499 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 UBALD2Q8IYN6 164 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 REXO1Q8N1G1 1221 aaKnown RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 LRRC47Q8N1G4 583 aaKnown RBP4.63□□□□□ -1.67
C2CD3-214ENST00000540057 LCORLQ8N3X6 602 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 CYP2W1Q8TAV3 490 aa4.63□□□□□ -1.67
C2CD3-214ENST00000540057 KAT2BQ92831 832 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms