RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 CEP57L1Q8IYX8 460 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 FSIP1Q8NA03 581 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 PAGE5Q96GU1 130 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 MSLNLQ96KJ4 702 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 ACCSQ96QU6 501 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 CDCA3Q99618 268 aaPredicted RBP19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 PYM1Q9BRP8 204 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 COL25A1Q9BXS0 654 aaPredicted RBP19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 PCDHB13Q9Y5F0 798 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 TCF20Q9UGU0 1960 aaKnown RBP19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 C2CD2LO14523 706 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 TADA2AO75478 443 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 HOXD13P35453 343 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 NDUFV1P49821 464 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 SPAG1Q07617 926 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 UPP1Q16831 310 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 KIAA0319Q5VV43 1072 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 LLGL2Q6P1M3 1020 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 UNC13DQ70J99 1090 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 C3orf58Q8NDZ4 430 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 ZSWIM2Q8NEG5 633 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 CHST7Q9NS84 486 aa19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 CPSF3Q9UKF6 684 aaKnown RBP19.95■□□□□ 0.78
SNRPA1-203ENST00000540017 LACTBL1A8MY62 500 aa19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 KLRC4O43908 158 aa19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 CNPP09543 421 aaKnown RBP19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 SYKP43405 635 aa19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 ACOT2P49753 483 aa19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 ALCAMQ13740 583 aa19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 SLFN12LQ6IEE8 588 aa19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 EPM2AIP1Q7L775 607 aaPredicted RBP19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 PLEKHA5Q9HAU0 1116 aa19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 MRPL17Q9NRX2 175 aaKnown RBP19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 STK39Q9UEW8 545 aa19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 AGO2Q9UKV8 859 aaKnown RBP19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 PDCD11Q14690 1871 aaKnown RBP19.94■□□□□ 0.78
SNRPA1-203ENST00000540017 C5orf42Q9H799 3197 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 URODP06132 367 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 ADRB2P07550 413 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 IL9P15248 144 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 GLUD2P49448 558 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 DSG1Q02413 1049 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 BMS1Q14692 1282 aaKnown RBP19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 ZBTB6Q15916 424 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 FAM26FQ5R3K3 315 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 PTCRAQ6ISU1 281 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 DCLRE1AQ6PJP8 1040 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 CRELD2Q6UXH1 353 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 TMEM184AQ6ZMB5 413 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 POMGNT1Q8WZA1 660 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 NECAB3Q96P71 396 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 KLHL5Q96PQ7 755 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 RPF1Q9H9Y2 349 aaKnown RBP19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 SLC38A7Q9NVC3 462 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 TUBGCP4Q9UGJ1 667 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 USP25Q9UHP3 1055 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 EXOC7Q9UPT5 735 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 HCFC2Q9Y5Z7 792 aa19.93■□□□□ 0.78
SNRPA1-203ENST00000540017 PVALEFA0A1B0GWK0 134 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 GRXCR2A6NFK2 248 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 TMEM189-UBE2V1I3L0A0 370 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 B3GAT3O94766 335 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 KYAT1Q16773 422 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 USP41Q3LFD5 358 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 RTP2Q5QGT7 225 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 SYCP3Q8IZU3 236 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 ADAMTS19Q8TE59 1207 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 SLC22A17Q8WUG5 538 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 UROC1Q96N76 676 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 CBWD1Q9BRT8 395 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 CD207Q9UJ71 328 aa19.92■□□□□ 0.78
SNRPA1-203ENST00000540017 SF3B1O75533 1304 aaKnown RBP eCLIP19.92■□□□□ 0.786e-7■■■■■ 56
SNRPA1-203ENST00000540017 I3L4J1 428 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 PODXLO00592 558 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 PRR29P0C7W0 189 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 EPCAMP16422 314 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 BRCC3P46736 316 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 GUCY2FP51841 1108 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 PPP2R3AQ06190 1150 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 POSTNQ15063 836 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 FAM171A1Q5VUB5 890 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 PRSS55Q6UWB4 352 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 ZNF507Q8TCN5 953 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 RIN2Q8WYP3 895 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 FAM212AQ96EL1 285 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 SAAL1Q96ER3 474 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 KIF12Q96FN5 646 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 RXFP1Q9HBX9 757 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 SLC39A2Q9NP94 309 aa19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 CIZ1Q9ULV3 898 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-203ENST00000540017 DLL1O00548 723 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 EIF3DO15371 548 aaKnown RBP eCLIP19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 TEX28O15482 410 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 MBTPS2O43462 519 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 ZNF202O95125 648 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 WNT7BP56706 349 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 JADE1Q6IE81 842 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 KIAA1841Q6NSI8 718 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 ANKRD54Q6NXT1 300 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 SYCE2Q6PIF2 218 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms