RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 TBCKQ8TEA7 893 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 MRGBPQ9NV56 204 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 TBCCD1Q9NVR7 557 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 TMEM260Q9NX78 707 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 L1RE1Q9UN81 338 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 A0A1W2PRQ8 180 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 PPP1R11O60927 126 aaPredicted RBP13.43□□□□□ -0.26
DDX55-206ENST00000539934 N4BP1O75113 896 aaKnown RBP13.43□□□□□ -0.26
DDX55-206ENST00000539934 PTPRAP18433 802 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 STAT6P42226 847 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 AFMP43652 599 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 AP2B1P63010 937 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 JAG1P78504 1218 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 XRCC4Q13426 336 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 E2F2Q14209 437 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 C15orf59Q2T9L4 293 aaPredicted RBP13.43□□□□□ -0.26
DDX55-206ENST00000539934 SARM1Q6SZW1 724 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.43□□□□□ -0.26
DDX55-206ENST00000539934 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 POLMQ9NP87 494 aaPredicted RBP13.43□□□□□ -0.26
DDX55-206ENST00000539934 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.43□□□□□ -0.26
DDX55-206ENST00000539934 FBXL5Q9UKA1 691 aa13.43□□□□□ -0.26
DDX55-206ENST00000539934 XIRP2A4UGR9 3374 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 RASA4BC9J798 803 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 N4BP3O15049 544 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 NDUFB10O96000 172 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 GZMAP12544 262 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 DSTNP60981 165 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 TUBB4BP68371 445 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 GBE1Q04446 702 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 HSPA14Q0VDF9 509 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 PPFIA1Q13136 1202 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 CMPK2Q5EBM0 449 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 PALB2Q86YC2 1186 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 FLCNQ8NFG4 579 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 CASP10Q92851 521 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 GLMNQ92990 594 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 MTMR8Q96EF0 704 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 STAMBPL1Q96FJ0 436 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 GMCL1Q96IK5 515 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 RIC8AQ9NPQ8 531 aa13.42□□□□□ -0.26
DDX55-206ENST00000539934 SCHIP1Q9P0W5 487 aaPredicted RBP13.42□□□□□ -0.26
DDX55-206ENST00000539934 FAM32AQ9Y421 112 aaKnown RBP13.42□□□□□ -0.26
DDX55-206ENST00000539934 A0A0G2JLL6 359 aaPredicted RBP13.41□□□□□ -0.26
DDX55-206ENST00000539934 PHF20L1A8MW92 1017 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 RNF40O75150 1001 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 ANP32DO95626 131 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 BMP3P12645 472 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 QRICH1Q2TAL8 776 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 PRRT2Q7Z6L0 340 aaPredicted RBP13.41□□□□□ -0.26
DDX55-206ENST00000539934 NPLOC4Q8TAT6 608 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 EPS8L3Q8TE67 593 aaKnown RBP13.41□□□□□ -0.26
DDX55-206ENST00000539934 NCSTNQ92542 709 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 KIFAP3Q92845 792 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 CCDC42Q96M95 316 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 NUP88Q99567 741 aaPredicted RBP13.41□□□□□ -0.26
DDX55-206ENST00000539934 HERC2P3Q9BVR0 1158 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 CRISPLD2Q9H0B8 497 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 MAN1B1Q9UKM7 699 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 RAB21Q9UL25 225 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 AFG3L2Q9Y4W6 797 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.41□□□□□ -0.26
DDX55-206ENST00000539934 ATP6V1G2O95670 118 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 TUBBP07437 444 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 OR52Z1P0C646 297 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 CCNG1P51959 295 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 SNX16P57768 344 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 BPIFB3P59826 476 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 NT5DC1Q5TFE4 455 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 USP38Q8NB14 1042 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 PXYLP1Q8TE99 480 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 SH3KBP1Q96B97 665 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 CFAP36Q96G28 342 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 PAGE5Q96GU1 130 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 GBA3Q9H227 469 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 NOD2Q9HC29 1040 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 CYLDQ9NQC7 956 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 MOCS1Q9NZB8 636 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 ZBTB21Q9ULJ3 1066 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 STXBP5LQ9Y2K9 1186 aa13.41□□□□□ -0.26
DDX55-206ENST00000539934 ZNF536O15090 1300 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 A0A1W2PRG0 241 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 CXCL11O14625 94 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 GLI1P08151 1106 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 GLULP15104 373 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 ANXA13P27216 316 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 CDC25AP30304 524 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 CETN2P41208 172 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 SARSP49591 514 aaKnown RBP13.4□□□□□ -0.26
DDX55-206ENST00000539934 ORC2Q13416 577 aaPredicted RBP13.4□□□□□ -0.26
DDX55-206ENST00000539934 SEPT6Q14141 434 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 UBE2SQ16763 222 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 AADATQ8N5Z0 425 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 VPS50Q96JG6 964 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 GLT8D2Q9H1C3 349 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 PSTPIP2Q9H939 334 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 RMND1Q9NWS8 449 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 DACH1Q9UI36 760 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms