RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CHMP6Q96FZ7 201 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 RSRC1Q96IZ7 334 aaKnown RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 FAM161BQ96MY7 647 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 CITED4Q96RK1 184 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 KRT12Q99456 494 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 TXLNGYQ9BZA5 131 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 TANGO6Q9C0B7 1094 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 ZMYND12Q9H0C1 365 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 STMN4Q9H169 189 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 MMRN2Q9H8L6 949 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 ARHGEF10LQ9HCE6 1279 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 XPNPEP3Q9NQH7 507 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 PRDM5Q9NQX1 630 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 HOMER3Q9NSC5 361 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 BARHL2Q9NY43 387 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 SUCLA2Q9P2R7 463 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 SALL4Q9UJQ4 1053 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 TPX2Q9ULW0 747 aaKnown RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 PCDHA6Q9UN73 950 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 TFR2Q9UP52 801 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 TMX2Q9Y320 296 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 PCDHA8Q9Y5H6 950 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 MUC3AQ02505 3323 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 MROH7Q68CQ1 1323 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 A0A0G2JMZ2 1700 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 GOLGA6L10A0A0M3HER8 536 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 FAM187AA6NFU0 413 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 RAD51CO43502 376 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 PALMO75781 387 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 FLOT1O75955 427 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 KIF4AO95239 1232 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 PLEKP08567 350 aaPredicted RBP8.24□□□□□ -1.09
CCDC60-204ENST00000539847 ALADP13716 330 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 AKR1A1P14550 325 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 PLCG1P19174 1290 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 ECHS1P30084 290 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 PRKCIP41743 596 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 KLK7P49862 253 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 ELF3P78545 371 aaPredicted RBP8.24□□□□□ -1.09
CCDC60-204ENST00000539847 FPGSQ05932 587 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 KCNMA1Q12791 1236 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 C11orf91Q3C1V1 193 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 FAM47AQ5JRC9 791 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 FAM83BQ5T0W9 1011 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 C6orf118Q5T5N4 469 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 LRRC55Q6ZSA7 311 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 CPLX4Q7Z7G2 160 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 FAM228AQ86W67 206 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 RASSF8Q8NHQ8 419 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 MYLIPQ8WY64 445 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 N4BP2L2Q92802 583 aaPredicted RBP8.24□□□□□ -1.09
CCDC60-204ENST00000539847 XPO6Q96QU8 1125 aaKnown RBP8.24□□□□□ -1.09
CCDC60-204ENST00000539847 NAP1L3Q99457 506 aaPredicted RBP8.24□□□□□ -1.09
CCDC60-204ENST00000539847 TINF2Q9BSI4 451 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 RAB34Q9BZG1 259 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 TMEM60Q9H2L4 133 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 CD248Q9HCU0 757 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 DCP1AQ9NPI6 582 aaPredicted RBP8.24□□□□□ -1.09
CCDC60-204ENST00000539847 MCM9Q9NXL9 1143 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 ARPP21Q9UBL0 812 aaPredicted RBP8.24□□□□□ -1.09
CCDC60-204ENST00000539847 COL4A3BPQ9Y5P4 624 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 MYH1P12882 1939 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 SYNGAP1Q96PV0 1343 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 EYSQ5T1H1 3165 aa8.24□□□□□ -1.09
CCDC60-204ENST00000539847 A0A1W2PQ45 241 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 A0A1W2PQY0 241 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 CCDC169A6NNP5 214 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 DCDC2CA8MYV0 355 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 PGRMC1O00264 195 aaKnown RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 SIAH2O43255 324 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 ADAMTS4O75173 837 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 NOL4O94818 638 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 RAG1P15918 1043 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 CCND1P24385 295 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 CST5P28325 142 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 CTNNA1P35221 906 aaKnown RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 SLC1A4P43007 532 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 MMP13P45452 471 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 ZNF131P52739 623 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 GDF10P55107 478 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 GRIK3Q13003 919 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 DSC3Q14574 896 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 KCTD2Q14681 263 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 NONOQ15233 471 aaKnown RBP eCLIP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 UAP1Q16222 522 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 ZNF792Q3KQV3 632 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 ZCWPW2Q504Y3 356 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 CMPK2Q5EBM0 449 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 TTC19Q6DKK2 380 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 MAMDC4Q6UXC1 1216 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 NCAPG2Q86XI2 1143 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 TRIM59Q8IWR1 403 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 LRRC57Q8N9N7 239 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 KIAA0895Q8NCT3 520 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 ATXN2LQ8WWM7 1075 aaKnown RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 SCG3Q8WXD2 468 aaKnown RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 VTI1AQ96AJ9 217 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 HVCN1Q96D96 273 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 FAXDC2Q96IV6 333 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms