RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 TMEM60Q9H2L4 133 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 PDZD7Q9H5P4 517 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 GOLGA2P5Q9HBQ8 144 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 DLL3Q9NYJ7 618 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 STK39Q9UEW8 545 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 CHD8Q9HCK8 2581 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 TRIP11Q15643 1979 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 MAP1BP46821 2468 aaKnown RBP16.46■□□□□ 0.23
USB1-203ENST00000539737 KMT2BQ9UMN6 2715 aaPredicted RBP16.46■□□□□ 0.23
USB1-203ENST00000539737 A0A1B0GUA9 196 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 PDIA4P13667 645 aaKnown RBP16.46■□□□□ 0.23
USB1-203ENST00000539737 AXLP30530 894 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 HOXC13P31276 330 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 OR1D2P34982 312 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 TOB1P50616 345 aaPredicted RBP16.46■□□□□ 0.23
USB1-203ENST00000539737 TFDP1Q14186 410 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 GRM2Q14416 872 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 MXD4Q14582 209 aaPredicted RBP16.46■□□□□ 0.23
USB1-203ENST00000539737 PUM1Q14671 1186 aaKnown RBP eCLIP16.46■□□□□ 0.23
USB1-203ENST00000539737 LIN9Q5TKA1 542 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 ELMSAN1Q6PJG2 1045 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 TPRG1Q6ZUI0 275 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 HDAC7Q8WUI4 952 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 NXPE3Q969Y0 559 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 HSD17B14Q9BPX1 270 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 TTPALQ9BTX7 342 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 LTB4R2Q9NPC1 389 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 HEBP1Q9NRV9 189 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.46■□□□□ 0.23
USB1-203ENST00000539737 NCDNQ9UBB6 729 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 DPP7Q9UHL4 492 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 GDAQ9Y2T3 454 aa16.46■□□□□ 0.23
USB1-203ENST00000539737 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.22
USB1-203ENST00000539737 LAMTOR5O43504 91 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 KINO60870 393 aaKnown RBP16.45■□□□□ 0.22
USB1-203ENST00000539737 CEBPBP17676 345 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 TUSC3Q13454 348 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 NBR1Q14596 966 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 AXDND1Q5T1B0 1012 aaPredicted RBP16.45■□□□□ 0.22
USB1-203ENST00000539737 ZC3H14Q6PJT7 736 aaKnown RBP16.45■□□□□ 0.22
USB1-203ENST00000539737 CD300LGQ6UXG3 332 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 C3orf58Q8NDZ4 430 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 PIK3R5Q8WYR1 880 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 DDX23Q9BUQ8 820 aaKnown RBP16.45■□□□□ 0.22
USB1-203ENST00000539737 RAB34Q9BZG1 259 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 SEMA4AQ9H3S1 761 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 PARD6AQ9NPB6 346 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.45■□□□□ 0.22
USB1-203ENST00000539737 PCDHB6Q9Y5E3 794 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 F5P12259 2224 aa16.45■□□□□ 0.22
USB1-203ENST00000539737 DCDC2BA2VCK2 349 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 STX6O43752 255 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 BMP15O95972 392 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 TKTP29401 623 aaKnown RBP16.44■□□□□ 0.22
USB1-203ENST00000539737 PRPHP41219 470 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 BRCC3P46736 316 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 PTGDRQ13258 359 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 BECN1Q14457 450 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 PCBP1Q15365 356 aaKnown RBP eCLIP16.44■□□□□ 0.22
USB1-203ENST00000539737 TMEM132AQ24JP5 1023 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 VARS2Q5ST30 1063 aaKnown RBP16.44■□□□□ 0.22
USB1-203ENST00000539737 ERMNQ8TAM6 284 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 TCEAL4Q96EI5 215 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 BCO2Q9BYV7 579 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 ANKEF1Q9NU02 776 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 CDY1Q9Y6F8 540 aa16.44■□□□□ 0.22
USB1-203ENST00000539737 MED24O75448 989 aa16.43■□□□□ 0.22
USB1-203ENST00000539737 DGAT1O75907 488 aa16.43■□□□□ 0.22
USB1-203ENST00000539737 FXR2P51116 673 aaKnown RBP eCLIP16.43■□□□□ 0.22
USB1-203ENST00000539737 ATXN1P54253 815 aaKnown RBP16.43■□□□□ 0.22
USB1-203ENST00000539737 PABPC1LQ4VXU2 614 aaKnown RBP16.43■□□□□ 0.22
USB1-203ENST00000539737 HAUS3Q68CZ6 603 aa16.43■□□□□ 0.22
USB1-203ENST00000539737 TANGO2Q6ICL3 276 aa16.43■□□□□ 0.22
USB1-203ENST00000539737 HACE1Q8IYU2 909 aa16.43■□□□□ 0.22
USB1-203ENST00000539737 C4orf32Q8N8J7 132 aa16.43■□□□□ 0.22
USB1-203ENST00000539737 NDRG2Q9UN36 371 aaKnown RBP16.43■□□□□ 0.22
USB1-203ENST00000539737 SMG5Q9UPR3 1016 aaKnown RBP16.43■□□□□ 0.22
USB1-203ENST00000539737 MTMR6Q9Y217 621 aa16.43■□□□□ 0.22
USB1-203ENST00000539737 STK24Q9Y6E0 443 aa16.43■□□□□ 0.22
USB1-203ENST00000539737 NCANO14594 1321 aa16.43■□□□□ 0.22
USB1-203ENST00000539737 LYPLA2O95372 231 aa16.42■□□□□ 0.22
USB1-203ENST00000539737 SPATA31C1P0DKV0 1188 aa16.42■□□□□ 0.22
USB1-203ENST00000539737 CLCNKBP51801 687 aa16.42■□□□□ 0.22
USB1-203ENST00000539737 ARPP19P56211 112 aa16.42■□□□□ 0.22
USB1-203ENST00000539737 ATP2C1P98194 919 aaPredicted RBP16.42■□□□□ 0.22
USB1-203ENST00000539737 MTAPQ13126 283 aa16.42■□□□□ 0.22
USB1-203ENST00000539737 RESTQ13127 1097 aa16.42■□□□□ 0.22
USB1-203ENST00000539737 FZD5Q13467 585 aa16.42■□□□□ 0.22
USB1-203ENST00000539737 CEP120Q8N960 986 aa16.42■□□□□ 0.22
USB1-203ENST00000539737 ZSCAN16Q9H4T2 348 aaPredicted RBP16.42■□□□□ 0.22
USB1-203ENST00000539737 MRPS23Q9Y3D9 190 aaKnown RBP16.42■□□□□ 0.22
USB1-203ENST00000539737 TICRRQ7Z2Z1 1910 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 PRKCBP05771 671 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 THP07101 528 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 RHOP08100 348 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 HNRNPA1P09651 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
USB1-203ENST00000539737 GJA1P17302 382 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 FCARP24071 287 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 CCR2P41597 374 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 SOX4Q06945 474 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms