RNA–Protein interactions for RNA: ENST00000539357.1

POLE-213, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 3

Gene POLE, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-213ENST00000539357 AKAP3O75969 853 aa13.76□□□□□ -0.21
POLE-213ENST00000539357 SRGAP2CP0DJJ0 459 aa13.76□□□□□ -0.21
POLE-213ENST00000539357 ENGP17813 658 aa13.76□□□□□ -0.21
POLE-213ENST00000539357 U2AF2P26368 475 aaKnown RBP eCLIP13.76□□□□□ -0.21
POLE-213ENST00000539357 SEMA3BQ13214 749 aa13.76□□□□□ -0.21
POLE-213ENST00000539357 HSP90AA2PQ14568 343 aaPredicted RBP13.76□□□□□ -0.21
POLE-213ENST00000539357 TEAD2Q15562 447 aa13.76□□□□□ -0.21
POLE-213ENST00000539357 IMMTQ16891 758 aaKnown RBP13.76□□□□□ -0.21
POLE-213ENST00000539357 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
POLE-213ENST00000539357 CWC27Q6UX04 472 aaKnown RBP13.76□□□□□ -0.21
POLE-213ENST00000539357 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
POLE-213ENST00000539357 TMEM74BQ9NUR3 256 aa13.76□□□□□ -0.21
POLE-213ENST00000539357 TAF6LQ9Y6J9 622 aa13.76□□□□□ -0.21
POLE-213ENST00000539357 MYO16Q9Y6X6 1858 aa13.76□□□□□ -0.21
POLE-213ENST00000539357 TEP1Q99973 2627 aaKnown RBP13.75□□□□□ -0.21
POLE-213ENST00000539357 H0Y626 953 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 ADAMTS3O15072 1205 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 RNF40O75150 1001 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 TRIM16O95361 564 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 LRG1P02750 347 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 RDXP35241 583 aaKnown RBP13.75□□□□□ -0.21
POLE-213ENST00000539357 DGKEP52429 567 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 ARPP19P56211 112 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 RAB33AQ14088 237 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 TARBP2Q15633 366 aaKnown RBP13.75□□□□□ -0.21
POLE-213ENST00000539357 STXBP5Q5T5C0 1151 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 PMS2CLQ68D20 193 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 NAIF1Q69YI7 327 aaPredicted RBP13.75□□□□□ -0.21
POLE-213ENST00000539357 FSTL4Q6MZW2 842 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 PDZD4Q76G19 769 aaPredicted RBP13.75□□□□□ -0.21
POLE-213ENST00000539357 CATIPQ7Z7H3 387 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 DEPDC1BQ8WUY9 529 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 FAM167AQ96KS9 214 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 CEP89Q96ST8 783 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 INO80BQ9C086 356 aaPredicted RBP13.75□□□□□ -0.21
POLE-213ENST00000539357 NXF3Q9H4D5 531 aaKnown RBP13.75□□□□□ -0.21
POLE-213ENST00000539357 SLITRK6Q9H5Y7 841 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 C8orf33Q9H7E9 229 aaPredicted RBP13.75□□□□□ -0.21
POLE-213ENST00000539357 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
POLE-213ENST00000539357 SF3B1O75533 1304 aaKnown RBP eCLIP13.74□□□□□ -0.21
POLE-213ENST00000539357 IGLV3-22A0A075B6J6 115 aa13.74□□□□□ -0.21
POLE-213ENST00000539357 CCDC163A0A0D9SF12 145 aa13.74□□□□□ -0.21
POLE-213ENST00000539357 I3L4J1 428 aa13.74□□□□□ -0.21
POLE-213ENST00000539357 SEC24AO95486 1093 aa13.74□□□□□ -0.21
POLE-213ENST00000539357 EGFP01133 1207 aa13.74□□□□□ -0.21
POLE-213ENST00000539357 KRT10P13645 584 aa13.74□□□□□ -0.21
POLE-213ENST00000539357 ZNF746Q6NUN9 644 aaPredicted RBP13.74□□□□□ -0.21
POLE-213ENST00000539357 RALGPS2Q86X27 583 aaPredicted RBP13.74□□□□□ -0.21
POLE-213ENST00000539357 FRMD1Q8N878 549 aa13.74□□□□□ -0.21
POLE-213ENST00000539357 FBRSL1Q9HCM7 1045 aaKnown RBP13.74□□□□□ -0.21
POLE-213ENST00000539357 CEP192Q8TEP8 1941 aa13.74□□□□□ -0.21
POLE-213ENST00000539357 ANTXRLA6NF34 631 aa13.73□□□□□ -0.21
POLE-213ENST00000539357 CHADO15335 359 aa13.73□□□□□ -0.21
POLE-213ENST00000539357 POU2F2P09086 479 aa13.73□□□□□ -0.21
POLE-213ENST00000539357 FTH1P19P0C7X4 201 aa13.73□□□□□ -0.21
POLE-213ENST00000539357 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
POLE-213ENST00000539357 ZNF410Q86VK4 478 aa13.73□□□□□ -0.21
POLE-213ENST00000539357 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
POLE-213ENST00000539357 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
POLE-213ENST00000539357 GOLGA4Q13439 2230 aaKnown RBP13.72□□□□□ -0.21
POLE-213ENST00000539357 TEX15Q9BXT5 2789 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 PTPRDP23468 1912 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 HELZP42694 1942 aaKnown RBP13.72□□□□□ -0.21
POLE-213ENST00000539357 ERICH2A1L162 156 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 TK2O00142 265 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 PRRG1O14668 218 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 SH3BP5O60239 455 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 SDSP20132 328 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 DNM2P50570 870 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 KCNC4Q03721 635 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 ZNF423Q2M1K9 1284 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 PLA2G4FQ68DD2 849 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 WWC2Q6AWC2 1192 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 SLCO6A1Q86UG4 719 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 TTC30AQ86WT1 665 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 GPR65Q8IYL9 337 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
POLE-213ENST00000539357 CTCFLQ8NI51 663 aaPredicted RBP13.72□□□□□ -0.21
POLE-213ENST00000539357 TMEM143Q96AN5 459 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 ARID3AQ99856 593 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 NUSAP1Q9BXS6 441 aaKnown RBP13.72□□□□□ -0.21
POLE-213ENST00000539357 UBN1Q9NPG3 1134 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 AVENQ9NQS1 362 aaPredicted RBP13.72□□□□□ -0.21
POLE-213ENST00000539357 DISC1Q9NRI5 854 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 PARP2Q9UGN5 583 aa13.72□□□□□ -0.21
POLE-213ENST00000539357 MUC22E2RYF6 1773 aaPredicted RBP13.71□□□□□ -0.21
POLE-213ENST00000539357 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 IGKV6-21A0A0C4DH24 114 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 MAP3K13O43283 966 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 STBD1O95210 358 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 CFIP05156 583 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 PRKCBP05771 671 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 CALM1P0DP23 149 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 CALM2P0DP24 149 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 CALM3P0DP25 149 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 ABCG1P45844 678 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 CFHR1Q03591 330 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 TRIP6Q15654 476 aaKnown RBP13.71□□□□□ -0.21
POLE-213ENST00000539357 CYP4A22Q5TCH4 519 aa13.71□□□□□ -0.21
POLE-213ENST00000539357 PCSK4Q6UW60 755 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms