RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 MED25Q71SY5 747 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 CDYL2Q8N8U2 506 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 CHST14Q8NCH0 376 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 NACC2Q96BF6 587 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 MRRFQ96E11 262 aaKnown RBP2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 TIMP4Q99727 224 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 TRIM55Q9BYV6 548 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 NRIP3Q9NQ35 241 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 FLRT1Q9NZU1 646 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 ZKSCAN5Q9Y2L8 839 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 ENTPD2Q9Y5L3 495 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 WNT6Q9Y6F9 365 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 CDK13Q14004 1512 aaKnown RBP2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 CCDC18Q5T9S5 1454 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 WDR7Q9Y4E6 1490 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 PREX2Q70Z35 1606 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 FRMPD1Q5SYB0 1578 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 AOX1Q06278 1338 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 EHBP1L1Q8N3D4 1523 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 CCDC78A2IDD5 438 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 ERVV-2B6SEH9 535 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 PDPK1O15530 556 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 MOSPD3O75425 235 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 GLRX3O76003 335 aaKnown RBP2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 FGFR4P22455 802 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 CANXP27824 592 aaKnown RBP2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 ERCC5P28715 1186 aaPredicted RBP2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 RAP2BP61225 183 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 HSD11B2P80365 405 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 MFSD14BQ5SR56 506 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 LMBR1LQ6UX01 489 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 ZNF782Q6ZMW2 699 aaPredicted RBP2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 PEG10Q86TG7 708 aaKnown RBP2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 THNSL2Q86YJ6 484 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 SAMD14Q8IZD0 417 aaPredicted RBP2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 SLC35B2Q8TB61 432 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 DENND1AQ8TEH3 1009 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 FUBP1Q96AE4 644 aaKnown RBP2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 ARMC5Q96C12 935 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 NELL2Q99435 816 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 ELF4Q99607 663 aaPredicted RBP2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 VPS33BQ9H267 617 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 ANLNQ9NQW6 1124 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 TOMM22Q9NS69 142 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 BTBD3Q9Y2F9 522 aa2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 TROQ12816 1431 aaPredicted RBP2.75□□□□□ -1.97
CBX3P4-201ENST00000538909 KDM5CP41229 1560 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 RICTORQ6R327 1708 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 A0A1W2PR48 441 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 FAM221BA6H8Z2 402 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 ELL2O00472 640 aaPredicted RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 INSIG1O15503 277 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 ORC4O43929 436 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 ITGA10O75578 1167 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 SEC24DO94855 1032 aaPredicted RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 GPANK1O95872 356 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 WT1P19544 449 aaPredicted RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 XPAP23025 273 aaPredicted RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 SREBF1P36956 1147 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 MAPK10P53779 464 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 SLC10A2Q12908 348 aaPredicted RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 RRP12Q5JTH9 1297 aaKnown RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 NPM2Q86SE8 214 aaKnown RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 DDX53Q86TM3 631 aaKnown RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 SSH3Q8TE77 659 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 FUBP3Q96I24 572 aaKnown RBP eCLIP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 BOD1Q96IK1 185 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 REXO4Q9GZR2 422 aaKnown RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 RNPEPQ9H4A4 650 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 UNKLQ9H9P5 680 aaKnown RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 TMEM74BQ9NUR3 256 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 ELOVL5Q9NYP7 299 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 SAMD15Q9P1V8 674 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 USP25Q9UHP3 1055 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 ADAM21Q9UKJ8 722 aa2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 MTO1Q9Y2Z2 717 aaKnown RBP2.74□□□□□ -1.97
CBX3P4-201ENST00000538909 SIGLEC1Q9BZZ2 1709 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 MYO5CQ9NQX4 1742 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 ABCC1P33527 1531 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 ZMYM4Q5VZL5 1548 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 ITSN2Q9NZM3 1697 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 LRRC9Q6ZRR7 1453 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 IGKV2D-30A0A075B6S6 120 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 ST20-MTHFSA0A0A6YYL1 179 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 LOC105371045A0A1W2PR82 267 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 LINC01548A6NM66 108 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 MPGP29372 298 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 FOLR3P41439 243 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 NRG3P56975 720 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 SF3B3Q15393 1217 aaKnown RBP2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 CYP2A13Q16696 494 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 MIDNQ504T8 468 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 TRIM61Q5EBN2 209 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 PRAMEF14Q5SWL7 426 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 MORN5Q5VZ52 161 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 KAZNQ674X7 775 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 ZDHHC17Q8IUH5 632 aa2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 FAM9AQ8IZU1 332 aaPredicted RBP2.73□□□□□ -1.97
CBX3P4-201ENST00000538909 FAM43AQ8N2R8 423 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms