RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 METTL23Q86XA0 190 aa9.46□□□□□ -0.89
GGA3-202ENST00000538886 CNOT6LQ96LI5 555 aaKnown RBP9.46□□□□□ -0.89
GGA3-202ENST00000538886 OSBPL7Q9BZF2 842 aa9.46□□□□□ -0.89
GGA3-202ENST00000538886 MTMR12Q9C0I1 747 aa9.46□□□□□ -0.89
GGA3-202ENST00000538886 SNX25Q9H3E2 840 aa9.46□□□□□ -0.89
GGA3-202ENST00000538886 C17orf75Q9HAS0 396 aa9.46□□□□□ -0.89
GGA3-202ENST00000538886 VPS18Q9P253 973 aa9.46□□□□□ -0.89
GGA3-202ENST00000538886 TTLL13PA6NNM8 815 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 HUS1O60921 280 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 GHRHRQ02643 423 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 DPYDQ12882 1025 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 PSMD2Q13200 908 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 ORC1Q13415 861 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 FAM171A1Q5VUB5 890 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 PPP4R3CPQ6ZMV5 832 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 B3GALT6Q96L58 329 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 PGLYRP2Q96PD5 576 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 CEP89Q96ST8 783 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 TIPINQ9BVW5 301 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 UPF3AQ9H1J1 476 aaKnown RBP9.46□□□□□ -0.9
GGA3-202ENST00000538886 PLEKHA4Q9H4M7 779 aa9.46□□□□□ -0.9
GGA3-202ENST00000538886 TYW1Q9NV66 732 aaKnown RBP9.46□□□□□ -0.9
GGA3-202ENST00000538886 GON4LQ3T8J9 2241 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 NCOR1O75376 2440 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 STK25O00506 426 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 OGTO15294 1046 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 NBNO60934 754 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 URI1O94763 535 aaPredicted RBP9.45□□□□□ -0.9
GGA3-202ENST00000538886 CCNE1P24864 410 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 CLCN6P51797 869 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 DUOXA2Q1HG44 320 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 ZBTB41Q5SVQ8 909 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 RRAGAQ7L523 313 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 PACS2Q86VP3 889 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 SCFD1Q8WVM8 642 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 AUTS2Q8WXX7 1259 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 IL23AQ9NPF7 189 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 AGPAT3Q9NRZ7 376 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 SIPA1L1O43166 1804 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 A0A0C4DFX4 3053 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 TTC28Q96AY4 2481 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 RFXAPO00287 272 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 RPLP2P05387 115 aaKnown RBP9.45□□□□□ -0.9
GGA3-202ENST00000538886 CLTAP09496 248 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 ITGB8P26012 769 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 POLR2BP30876 1174 aaKnown RBP9.45□□□□□ -0.9
GGA3-202ENST00000538886 NOMO2Q5JPE7 1267 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 PLPP4Q5VZY2 271 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 CDT1Q9H211 546 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 C1orf112Q9NSG2 853 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 ZNHIT6Q9NWK9 470 aaKnown RBP9.45□□□□□ -0.9
GGA3-202ENST00000538886 IFNKQ9P0W0 207 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 KIF2AO00139 706 aaPredicted RBP9.45□□□□□ -0.9
GGA3-202ENST00000538886 TSPAN1O60635 241 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 SKILP12757 684 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 CYP27A1Q02318 531 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 TTC19Q6DKK2 380 aaPredicted RBP9.45□□□□□ -0.9
GGA3-202ENST00000538886 CNKSR3Q6P9H4 555 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 TMEM192Q8IY95 271 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 DAW1Q8N136 415 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 USP38Q8NB14 1042 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 PPP2R3CQ969Q6 453 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 TOX2Q96NM4 488 aa9.45□□□□□ -0.9
GGA3-202ENST00000538886 LAMB1P07942 1786 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ADGRA3Q8IWK6 1321 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 HTTP42858 3142 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 TMCO5BA8MYB1 307 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 KCNJ18B7U540 433 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ENPP3O14638 875 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 KIF1CO43896 1103 aaKnown RBP9.44□□□□□ -0.9
GGA3-202ENST00000538886 LYPLA2O95372 231 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 MYL1P05976 194 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 SKIP12755 728 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 MUTP22033 750 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 MAGEA9P43362 315 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ALCAMQ13740 583 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 KCNJ12Q14500 433 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ZNF699Q32M78 642 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ZNF667Q5HYK9 610 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 DNAJC19Q96DA6 116 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ZNF446Q9NWS9 450 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 HCSTQ9UBK5 93 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 COL1A2P08123 1366 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ATAD5Q96QE3 1844 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.44□□□□□ -0.9
GGA3-202ENST00000538886 LACTBL1A8MY62 500 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 EIF3CLB5ME19 914 aaKnown RBP9.44□□□□□ -0.9
GGA3-202ENST00000538886 PRRG1O14668 218 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 HOXA2O43364 376 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 KRT9P35527 623 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ARL2P36404 184 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 VAMP7P51809 220 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 PTPN11Q06124 597 aaPredicted RBP9.44□□□□□ -0.9
GGA3-202ENST00000538886 RIN2Q8WYP3 895 aaPredicted RBP9.44□□□□□ -0.9
GGA3-202ENST00000538886 C18orf25Q96B23 403 aaPredicted RBP9.44□□□□□ -0.9
GGA3-202ENST00000538886 EIF3CQ99613 913 aaKnown RBP9.44□□□□□ -0.9
GGA3-202ENST00000538886 DNAI2Q9GZS0 605 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 PER2O15055 1255 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 TRAPPC3O43617 180 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 WEE2P0C1S8 567 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms