RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 IFT122Q9HBG6 1241 aa21.93■■□□□ 1.1
DDX55-205ENST00000538744 TNFSF13BQ9Y275 285 aa21.93■■□□□ 1.1
DDX55-205ENST00000538744 ANK1P16157 1881 aa21.93■■□□□ 1.1
DDX55-205ENST00000538744 KAT6AQ92794 2004 aa21.93■■□□□ 1.1
DDX55-205ENST00000538744 B4GALT5O43286 388 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 TBXAS1P24557 533 aaPredicted RBP21.92■■□□□ 1.1
DDX55-205ENST00000538744 DNA2P51530 1060 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 TCEAL1Q15170 157 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 GRIK4Q16099 956 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 CCDC70Q6NSX1 233 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 DAAM2Q86T65 1068 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 MMGT1Q8N4V1 131 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 SPATA4Q8NEY3 305 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 IMPG2Q9BZV3 1241 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 ARFGAP3Q9NP61 516 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 ACP6Q9NPH0 428 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 TARSL2A2RTX5 802 aaKnown RBP21.92■■□□□ 1.1
DDX55-205ENST00000538744 ERLIN1O75477 346 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 HOXC6P09630 235 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 HADHBP55084 474 aaKnown RBP21.92■■□□□ 1.1
DDX55-205ENST00000538744 BPIFB4P59827 614 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 GPC5P78333 572 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 CUL2Q13617 745 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 NCOA4Q13772 614 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 SPOPLQ6IQ16 392 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 DDX1Q92499 740 aaKnown RBP21.92■■□□□ 1.1
DDX55-205ENST00000538744 ARID3AQ99856 593 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 GOLPH3Q9H4A6 298 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 OSGEPQ9NPF4 335 aa21.92■■□□□ 1.1
DDX55-205ENST00000538744 DOCK3Q8IZD9 2030 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 A0A087WZ62 844 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 ADCY6O43306 1168 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 ZEB2O60315 1214 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 ZRANB2O95218 330 aaKnown RBP eCLIP21.91■■□□□ 1.1
DDX55-205ENST00000538744 CLTAP09496 248 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 NOP14P78316 857 aaKnown RBP21.91■■□□□ 1.1
DDX55-205ENST00000538744 EEF1DP3Q658K8 133 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 WDR93Q6P2C0 686 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 SAPCD2Q86UD0 394 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 ZNF677Q86XU0 584 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 THNSL1Q8IYQ7 743 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 FAM212AQ96EL1 285 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 PBKQ96KB5 322 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 FDXACB1Q9BRP7 624 aaPredicted RBP21.91■■□□□ 1.1
DDX55-205ENST00000538744 CDT1Q9H211 546 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 APOBEC3GQ9HC16 384 aaKnown RBP21.91■■□□□ 1.1
DDX55-205ENST00000538744 STXBP5LQ9Y2K9 1186 aa21.91■■□□□ 1.1
DDX55-205ENST00000538744 BUB1BO60566 1050 aaPredicted RBP21.9■■□□□ 1.1
DDX55-205ENST00000538744 MCM3P25205 808 aa21.9■■□□□ 1.1
DDX55-205ENST00000538744 INHBEP58166 350 aa21.9■■□□□ 1.1
DDX55-205ENST00000538744 DUOXA2Q1HG44 320 aa21.9■■□□□ 1.1
DDX55-205ENST00000538744 C17orf99Q6UX52 265 aa21.9■■□□□ 1.1
DDX55-205ENST00000538744 NT5DC3Q86UY8 548 aa21.9■■□□□ 1.1
DDX55-205ENST00000538744 IFNL1Q8IU54 200 aa21.9■■□□□ 1.1
DDX55-205ENST00000538744 HNRNPLLQ8WVV9 542 aaKnown RBP21.9■■□□□ 1.1
DDX55-205ENST00000538744 MS4A14Q96JA4 679 aa21.9■■□□□ 1.1
DDX55-205ENST00000538744 RNF216Q9NWF9 866 aaPredicted RBP21.9■■□□□ 1.1
DDX55-205ENST00000538744 EHD2Q9NZN4 543 aa21.9■■□□□ 1.1
DDX55-205ENST00000538744 AMFRQ9UKV5 643 aa21.9■■□□□ 1.1
DDX55-205ENST00000538744 PCDHB2Q9Y5E7 798 aa21.9■■□□□ 1.1
DDX55-205ENST00000538744 KCNK3O14649 394 aa21.89■■□□□ 1.1
DDX55-205ENST00000538744 ECM2O94769 699 aaPredicted RBP21.89■■□□□ 1.1
DDX55-205ENST00000538744 CLSTN1O94985 981 aa21.89■■□□□ 1.1
DDX55-205ENST00000538744 VTNP04004 478 aa21.89■■□□□ 1.1
DDX55-205ENST00000538744 SLC10A3P09131 477 aa21.89■■□□□ 1.1
DDX55-205ENST00000538744 IQCF3P0C7M6 154 aa21.89■■□□□ 1.1
DDX55-205ENST00000538744 MTMR12Q9C0I1 747 aa21.89■■□□□ 1.1
DDX55-205ENST00000538744 ABCB6Q9NP58 842 aa21.89■■□□□ 1.1
DDX55-205ENST00000538744 SMARCAL1Q9NZC9 954 aa21.89■■□□□ 1.1
DDX55-205ENST00000538744 CTTNBP2NLQ9P2B4 639 aa21.89■■□□□ 1.1
DDX55-205ENST00000538744 RRN3P2A6NIE6 340 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 A6NJR5 290 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 DYNC1LI2O43237 492 aaPredicted RBP21.89■■□□□ 1.09
DDX55-205ENST00000538744 ATP8B1O43520 1251 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 SEC31AO94979 1220 aaKnown RBP21.89■■□□□ 1.09
DDX55-205ENST00000538744 IL18RAPO95256 599 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 ACO1P21399 889 aaKnown RBP21.89■■□□□ 1.09
DDX55-205ENST00000538744 VSNL1P62760 191 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 AMHR2Q16671 573 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 PRAMEF19Q5SWL8 479 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 MARCH8Q5T0T0 291 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 USP6NLQ92738 828 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 SELENOOQ9BVL4 669 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 FLRT1Q9NZU1 646 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 GNEQ9Y223 722 aaKnown RBP21.89■■□□□ 1.09
DDX55-205ENST00000538744 NUB1Q9Y5A7 615 aa21.89■■□□□ 1.09
DDX55-205ENST00000538744 MGAMO43451 1857 aa21.88■■□□□ 1.09
DDX55-205ENST00000538744 B4GALT4O60513 344 aa21.88■■□□□ 1.09
DDX55-205ENST00000538744 ASS1P00966 412 aaKnown RBP21.88■■□□□ 1.09
DDX55-205ENST00000538744 MCF2P10911 925 aa21.88■■□□□ 1.09
DDX55-205ENST00000538744 CLEC16AQ2KHT3 1053 aa21.88■■□□□ 1.09
DDX55-205ENST00000538744 CDR2LQ86X02 465 aaPredicted RBP21.88■■□□□ 1.09
DDX55-205ENST00000538744 NLRP7Q8WX94 980 aa21.88■■□□□ 1.09
DDX55-205ENST00000538744 HES6Q96HZ4 224 aa21.88■■□□□ 1.09
DDX55-205ENST00000538744 PPP1R16BQ96T49 567 aa21.88■■□□□ 1.09
DDX55-205ENST00000538744 RPF1Q9H9Y2 349 aaKnown RBP21.88■■□□□ 1.09
DDX55-205ENST00000538744 COG5Q9UP83 839 aa21.88■■□□□ 1.09
DDX55-205ENST00000538744 PCDHB4Q9Y5E5 795 aa21.88■■□□□ 1.09
DDX55-205ENST00000538744 FAM170AA1A519 330 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 MTA2O94776 668 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms