RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ACO2Q99798 780 aaKnown RBP9.49□□□□□ -0.89
DDB1-212ENST00000538470 PTPRHQ9HD43 1115 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 KMT5AQ9NQR1 393 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.49□□□□□ -0.89
DDB1-212ENST00000538470 BACE2Q9Y5Z0 518 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 PATJQ8NI35 1801 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 CCDC169A6NNP5 214 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 E9PMD0 336 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 H0Y858 1186 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 H0YCG3 227 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 GFRA3O60609 400 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 LAMP2P13473 410 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 NPR3P17342 541 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 SCP2P22307 547 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 MAPK7Q13164 816 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 UPP1Q16831 310 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 UVSSAQ2YD98 709 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 GLRA4Q5JXX5 417 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 ARL6IP4Q66PJ3 421 aaKnown RBP9.48□□□□□ -0.89
DDB1-212ENST00000538470 RINT1Q6NUQ1 792 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 C1orf186Q6ZWK4 172 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 MTSS1LQ765P7 747 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 TAS1R3Q7RTX0 852 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 CCDC105Q8IYK2 499 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 SLC44A3Q8N4M1 653 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 SLC7A14Q8TBB6 771 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 KCNN1Q92952 543 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 NTPCRQ9BSD7 190 aaKnown RBP9.48□□□□□ -0.89
DDB1-212ENST00000538470 RUSC1Q9BVN2 902 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 UPF2Q9HAU5 1272 aaKnown RBP9.48□□□□□ -0.89
DDB1-212ENST00000538470 SLC2A4RGQ9NR83 387 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 FAM86C1Q9NVL1 165 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 CNTN3Q9P232 1028 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 CDH7Q9ULB5 785 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 USP20Q9Y2K6 914 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 GVINP1Q7Z2Y8 2422 aa9.48□□□□□ -0.89
DDB1-212ENST00000538470 TSC2P49815 1807 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 MYO15AQ9UKN7 3530 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 PTPRZ1P23471 2315 aaPredicted RBP9.47□□□□□ -0.89
DDB1-212ENST00000538470 SMIM28A0A1B0GU29 152 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 PP2D1A8MPX8 630 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 H3BQV1 296 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 ABLIM1O14639 778 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 SYN3O14994 580 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 NARSO43776 548 aaKnown RBP9.47□□□□□ -0.89
DDB1-212ENST00000538470 CFHP08603 1231 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 MYBP10242 640 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 PLS3P13797 630 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 KCNE1P15382 129 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 RFX1P22670 979 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 MCM2P49736 904 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 CLCNKBP51801 687 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 SMTNP53814 917 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 STRN3Q13033 797 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 NOLC1Q14978 699 aaKnown RBP eCLIP9.47□□□□□ -0.89
DDB1-212ENST00000538470 MCTP1Q6DN14 999 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 SLC8B1Q6J4K2 584 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 PHLDB3Q6NSJ2 640 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 ALKAL1Q6UXT8 129 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 ZPBP2Q6X784 338 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 GRASPQ7Z6J2 395 aaPredicted RBP9.47□□□□□ -0.89
DDB1-212ENST00000538470 CEP120Q8N960 986 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 RSAD2Q8WXG1 361 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 CDK5RAP3Q96JB5 506 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 TMX3Q96JJ7 454 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 AK8Q96MA6 479 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 ACAP3Q96P50 834 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 MMTAG2Q9BU76 263 aaKnown RBP9.47□□□□□ -0.89
DDB1-212ENST00000538470 CXCL16Q9H2A7 254 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 ARHGEF3Q9NR81 526 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 KCNH3Q9ULD8 1083 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 CDY1Q9Y6F8 540 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 NUMBLQ9Y6R0 609 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 ANK1P16157 1881 aa9.47□□□□□ -0.89
DDB1-212ENST00000538470 KRBA1A5PL33 1030 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 H7C4K7 107 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 PODXLO00592 558 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 ADAM12O43184 909 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 TOM1L1O75674 476 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 BMP15O95972 392 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 GJB2P29033 226 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 TKTP29401 623 aaKnown RBP9.46□□□□□ -0.9
DDB1-212ENST00000538470 RPL9P32969 192 aaKnown RBP9.46□□□□□ -0.9
DDB1-212ENST00000538470 OR1D2P34982 312 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 SLC12A3P55017 1021 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 SOX4Q06945 474 aaPredicted RBP9.46□□□□□ -0.9
DDB1-212ENST00000538470 IL17AQ16552 155 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 KYAT1Q16773 422 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 TMEM119Q4V9L6 283 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 PABPC1LQ4VXU2 614 aaKnown RBP9.46□□□□□ -0.9
DDB1-212ENST00000538470 AXDND1Q5T1B0 1012 aaPredicted RBP9.46□□□□□ -0.9
DDB1-212ENST00000538470 CD300LGQ6UXG3 332 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 KCNK18Q7Z418 384 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 SYT2Q8N9I0 419 aaPredicted RBP9.46□□□□□ -0.9
DDB1-212ENST00000538470 DTWD2Q8NBA8 298 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 C3orf58Q8NDZ4 430 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 GPR152Q8TDT2 470 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 TCHPQ9BT92 498 aa9.46□□□□□ -0.9
DDB1-212ENST00000538470 TARS2Q9BW92 718 aaKnown RBP9.46□□□□□ -0.9
DDB1-212ENST00000538470 TBC1D17Q9HA65 648 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms