RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PRPF4O43172 522 aaKnown RBP eCLIP5.67□□□□□ -1.5
LRP6-203ENST00000538239 EVI5O60447 810 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 CSDE1O75534 798 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 FGFR4P22455 802 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PCSK1P29120 753 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 HARS2P49590 506 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 EPHB4P54760 987 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 FBXW4P57775 412 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 POU5F1BQ06416 359 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 GTF2H3Q13889 308 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PTGISQ16647 500 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 KIF19Q2TAC6 998 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 TUBB8Q3ZCM7 444 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PPP4R4Q6NUP7 873 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 SLC30A10Q6XR72 485 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 RASGRP2Q7LDG7 609 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 ZFPM1Q8IX07 1006 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 DHX40Q8IX18 779 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 OR6P1Q8NGX9 317 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 DCUN1D1Q96GG9 259 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 FGD4Q96M96 766 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 FMO2Q99518 471 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 OSMRQ99650 979 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 CAPS2Q9BXY5 557 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 EHD4Q9H223 541 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 VPS33BQ9H267 617 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 ANKEF1Q9NU02 776 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 BCAP29Q9UHQ4 241 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 DIS3Q9Y2L1 958 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 SNX24Q9Y343 169 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PPP1R12AO14974 1030 aaPredicted RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 FMO5P49326 533 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 RASSF2P50749 326 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 ERVK-9P63128 1117 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 ERVK-24P63145 666 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 TAP1Q03518 808 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 GPS1Q13098 491 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PCNX4Q63HM2 1172 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 MOB2Q70IA6 237 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 TLK2Q86UE8 772 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 METTL16Q86W50 562 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 CEP120Q8N960 986 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PPP1R13LQ8WUF5 828 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 SOCS4Q8WXH5 440 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 ATXN7L3BQ96GX2 97 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 AGAP3Q96P47 875 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 CCSER1Q9C0I3 900 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 AGO4Q9HCK5 861 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 EHD2Q9NZN4 543 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 APEX2Q9UBZ4 518 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 TBX20Q9UMR3 447 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 EEF2KO00418 725 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 CXCL11O14625 94 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 URODP06132 367 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 CLTAP09496 248 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 SCP2P22307 547 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 BRD2P25440 801 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 DEUP1Q05D60 604 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 KCNB1Q14721 858 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PCSK7Q16549 785 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 IMPG1Q17R60 797 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 NFRKBQ6P4R8 1299 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 ATPAF2Q8N5M1 289 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PABPC5Q96DU9 382 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 MAP3K14Q99558 947 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 VPS11Q9H270 941 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 BCL2L12Q9HB09 334 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PDE11AQ9HCR9 933 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 DDX4Q9NQI0 724 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.67□□□□□ -1.5
LRP6-203ENST00000538239 VWA5AO00534 786 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 TTI1O43156 1089 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 RTN2O75298 545 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 B3GAT3O94766 335 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 NCAM1P13591 858 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 SMARCA1P28370 1054 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 SHMT1P34896 483 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 SERPINB6P35237 376 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 SOX10P56693 466 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 BEX3Q00994 111 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 MFSD10Q14728 455 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 DBN1Q16643 649 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 DCAF6Q58WW2 860 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 CYP4A22Q5TCH4 519 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PDXDC1Q6P996 788 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 POTEAQ6S8J7 498 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 MMS22LQ6ZRQ5 1243 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 RHOT1Q8IXI2 618 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 C1orf54Q8WWF1 131 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 GPRC5DQ9NZD1 345 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PCDHB12Q9Y5F1 795 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PHLPP1O60346 1717 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 CCDC195A0A1B0GUA6 201 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 CCDC78A2IDD5 438 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 GNGT2O14610 69 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 KCNN4O15554 427 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 POMCP01189 267 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 PDGFRAP16234 1089 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 IGFBP4P22692 258 aa5.66□□□□□ -1.5
LRP6-203ENST00000538239 RPA1P27694 616 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms