RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 STAT5BP51692 787 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 HIRAP54198 1017 aaPredicted RBP9.31□□□□□ -0.92
UBE3B-208ENST00000538070 CDR2Q01850 454 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 TRPC3Q13507 836 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 SUPT20HL1Q3ZLR7 823 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 SYCP2LQ5T4T6 812 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 TDRD10Q5VZ19 366 aaKnown RBP9.31□□□□□ -0.92
UBE3B-208ENST00000538070 CHADLQ6NUI6 762 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 DCUN1D2Q6PH85 259 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 B4GALNT4Q76KP1 1039 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 SLFN11Q7Z7L1 901 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 SULF1Q8IWU6 871 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 ANKRD42Q8N9B4 389 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 PRPF31Q8WWY3 499 aaKnown RBP9.31□□□□□ -0.92
UBE3B-208ENST00000538070 GPRASP2Q96D09 838 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 STRA6Q9BX79 667 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 KCNK9Q9NPC2 374 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 FAM114A2Q9NRY5 505 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 INTUQ9ULD6 942 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 A0A0A6YYK5 440 aaPredicted RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CAND2O75155 1236 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 KRT10P13645 584 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 GLRA2P23416 452 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 LSP1P33241 339 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 LRRC14Q15048 493 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CATSPERGQ6ZRH7 1159 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 NIPA1Q7RTP0 329 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CPLX4Q7Z7G2 160 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CEP120Q8N960 986 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 DYDC1Q8WWB3 177 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 KLRG1Q96E93 195 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 ZBED3Q96IU2 234 aaPredicted RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 PAIP2Q9BPZ3 127 aaKnown RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 MTMR12Q9C0I1 747 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CARD9Q9H257 536 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 RASSF4Q9H2L5 321 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 SLITRK6Q9H5Y7 841 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CHST7Q9NS84 486 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 BTBD7Q9P203 1132 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 NOCTQ9UK39 431 aaKnown RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 IRF6O14896 467 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 OATP04181 439 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 POTEJP0CG39 1038 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 TGFB2P61812 414 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CYP4A22Q5TCH4 519 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CYP4F22Q6NT55 531 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 TAS1R3Q7RTX0 852 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 FBXO16Q8IX29 292 aaPredicted RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 ZDHHC14Q8IZN3 488 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 SHC3Q92529 594 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 SYNCQ9H7C4 482 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 C10orf88Q9H8K7 445 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 MTRF1LQ9UGC7 380 aaKnown RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 FAM169AQ9Y6X4 670 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CEP350Q5VT06 3117 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 BTNL10A8MVZ5 291 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 RGS16O15492 202 aaPredicted RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 DKC1O60832 514 aaKnown RBP eCLIP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 ATP4AP20648 1035 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 UBA1P22314 1058 aaKnown RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 BRD2P25440 801 aaKnown RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 ECHS1P30084 290 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CLCN3P51790 818 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 PMS2P54278 862 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 TMC3Q7Z5M5 1100 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 EPS8L3Q8TE67 593 aaKnown RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 CALR3Q96L12 384 aaKnown RBP9.3□□□□□ -0.92
UBE3B-208ENST00000538070 TMEM59LQ9UK28 342 aa9.3□□□□□ -0.92
UBE3B-208ENST00000538070 HSPA9P38646 679 aaKnown RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 RAP1GAPP47736 663 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 ZNF280AP59817 542 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 PTENP60484 403 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 NOP14P78316 857 aaKnown RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 NCOA4Q13772 614 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 ACAD10Q6JQN1 1059 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 ABHD15Q6UXT9 468 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 SLC13A5Q86YT5 568 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 FMNL3Q8IVF7 1028 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 RBBP8NLQ8NC74 664 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 OLIG1Q8TAK6 271 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 DCPSQ96C86 337 aaKnown RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 NCANO14594 1321 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 GOLGA8MH3BSY2 632 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 ECEL1O95672 775 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 CST3P01034 146 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 RALAP11233 206 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 IFI35P80217 286 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 KRT17Q04695 432 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 LONRF1Q17RB8 773 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 HSDL1Q3SXM5 330 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 RUFY4Q6ZNE9 571 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 KCTD17Q8N5Z5 321 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 OTUD6BQ8N6M0 293 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 CDHR1Q96JP9 859 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 DDX23Q9BUQ8 820 aaKnown RBP9.29□□□□□ -0.92
UBE3B-208ENST00000538070 NRBP2Q9NSY0 501 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 GGT7Q9UJ14 662 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 NUB1Q9Y5A7 615 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 SYNGAP1Q96PV0 1343 aa9.29□□□□□ -0.92
UBE3B-208ENST00000538070 C10orf71Q711Q0 1435 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms