RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ERAP1Q9NZ08 941 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 LRRC37A2A6NM11 1700 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 FAM187AA6NFU0 413 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 BHMG1C9JSJ3 638 aaPredicted RBP14.55□□□□□ -0.08
SMG6-203ENST00000536871 MAGEB2O15479 319 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 RAD51CO43502 376 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 MSCO60682 206 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 PHACTR2O75167 634 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 PRKCBP05771 671 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 GLI1P08151 1106 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 MYBL2P10244 700 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 TXNP10599 105 aaKnown RBP14.55□□□□□ -0.08
SMG6-203ENST00000536871 GTF2A2P52657 109 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 PTENP60484 403 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 YWHAEP62258 255 aaKnown RBP14.55□□□□□ -0.08
SMG6-203ENST00000536871 LAMTOR4Q0VGL1 99 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 PPFIA1Q13136 1202 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 PLCB4Q15147 1175 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 KYAT1Q16773 422 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 SEL1L2Q5TEA6 688 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 MAIP1Q8WWC4 291 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 ZSWIM1Q9BR11 485 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 ANKFY1Q9P2R3 1169 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 RASAL2Q9UJF2 1139 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 MTUS1Q9ULD2 1270 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 COG5Q9UP83 839 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 UTP11Q9Y3A2 253 aaKnown RBP14.55□□□□□ -0.08
SMG6-203ENST00000536871 COL1A2P08123 1366 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 CNTNAP2Q9UHC6 1331 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 FGGP02679 453 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 CLTAP09496 248 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 CYP2C19P33261 490 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 ACOT2P49753 483 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 Q3C1V9 767 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 LIN9Q5TKA1 542 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 KLHL7Q8IXQ5 586 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 C1orf131Q8NDD1 294 aaKnown RBP14.54□□□□□ -0.08
SMG6-203ENST00000536871 SEC14L1Q92503 715 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 EMID1Q96A84 441 aaPredicted RBP14.54□□□□□ -0.08
SMG6-203ENST00000536871 ACO2Q99798 780 aaKnown RBP14.54□□□□□ -0.08
SMG6-203ENST00000536871 TCHPQ9BT92 498 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 NUP85Q9BW27 656 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 FAM129AQ9BZQ8 928 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 GOLPH3Q9H4A6 298 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 MRPL47Q9HD33 250 aaKnown RBP14.54□□□□□ -0.08
SMG6-203ENST00000536871 ADAM21Q9UKJ8 722 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 TRPC6Q9Y210 931 aa14.54□□□□□ -0.08
SMG6-203ENST00000536871 ACKR2O00590 384 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 ARIH2O95376 493 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 PGK2P07205 417 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 UNGP13051 313 aaPredicted RBP14.53□□□□□ -0.08
SMG6-203ENST00000536871 YBX3P16989 372 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMG6-203ENST00000536871 CHRNA3P32297 505 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 CTNNA1P35221 906 aaKnown RBP14.53□□□□□ -0.08
SMG6-203ENST00000536871 NSFP46459 744 aaKnown RBP14.53□□□□□ -0.08
SMG6-203ENST00000536871 CENPCQ03188 943 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 MTMR3Q13615 1198 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 DUOXA2Q1HG44 320 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 HSDL1Q3SXM5 330 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 SPDYCQ5MJ68 293 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 WDR78Q5VTH9 848 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 TSHZ1Q6ZSZ6 1077 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 RNF149Q8NC42 400 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 ST7Q9NRC1 585 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 VPS18Q9P253 973 aa14.53□□□□□ -0.08
SMG6-203ENST00000536871 CNOT8Q9UFF9 292 aaKnown RBP14.53□□□□□ -0.08
SMG6-203ENST00000536871 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMG6-203ENST00000536871 RBM47A0AV96 593 aaKnown RBP14.52□□□□□ -0.08
SMG6-203ENST00000536871 SPOPO43791 374 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 GRIN3BO60391 1043 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 ERLIN2O94905 339 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 IL18RAPO95256 599 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 GH1P01241 217 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 CYP1A1P04798 512 aaPredicted RBP14.52□□□□□ -0.08
SMG6-203ENST00000536871 DRG2P55039 364 aaKnown RBP14.52□□□□□ -0.08
SMG6-203ENST00000536871 NOP14P78316 857 aaKnown RBP14.52□□□□□ -0.08
SMG6-203ENST00000536871 TNFAIP2Q03169 654 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 NCOA4Q13772 614 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 FAM187BQ17R55 369 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 SGSM1Q2NKQ1 1148 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 MPZL3Q6UWV2 235 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 DLK2Q6UY11 383 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 EEPD1Q7L9B9 569 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 DNAAF5Q86Y56 855 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 FZD8Q9H461 694 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 PRMT7Q9NVM4 692 aaPredicted RBP14.52□□□□□ -0.08
SMG6-203ENST00000536871 PCDHA3Q9Y5H8 950 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 SCINQ9Y6U3 715 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 IVNS1ABPQ9Y6Y0 642 aa14.52□□□□□ -0.08
SMG6-203ENST00000536871 SCN4AP35499 1836 aa14.52□□□□□ -0.09
SMG6-203ENST00000536871 PODXLO00592 558 aa14.52□□□□□ -0.09
SMG6-203ENST00000536871 RNF40O75150 1001 aa14.52□□□□□ -0.09
SMG6-203ENST00000536871 VNN1O95497 513 aa14.52□□□□□ -0.09
SMG6-203ENST00000536871 COMTP21964 271 aa14.52□□□□□ -0.09
SMG6-203ENST00000536871 PHKA2P46019 1235 aa14.52□□□□□ -0.09
SMG6-203ENST00000536871 CARSP49589 748 aaKnown RBP14.52□□□□□ -0.09
SMG6-203ENST00000536871 RWDD2BP57060 319 aa14.52□□□□□ -0.09
SMG6-203ENST00000536871 RNASE9P60153 205 aaKnown RBP14.52□□□□□ -0.09
SMG6-203ENST00000536871 IRF5Q13568 498 aa14.52□□□□□ -0.09
SMG6-203ENST00000536871 ZNF792Q3KQV3 632 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms