RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 KRTAP17-1Q9BYP8 105 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 BRMS1Q9HCU9 246 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 GJB4Q9NTQ9 266 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 GABBR1Q9UBS5 961 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 DDX25Q9UHL0 483 aaKnown RBP7.91□□□□□ -1.14
YBX3-206ENST00000536823 DCTN4Q9UJW0 460 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 SAMM50Q9Y512 469 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 INSL6Q9Y581 213 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 KCNMB2Q9Y691 235 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 SQORQ9Y6N5 450 aa7.91□□□□□ -1.14
YBX3-206ENST00000536823 POU3F3P20264 500 aaPredicted RBP7.9□□□□□ -1.14
YBX3-206ENST00000536823 CD52P31358 61 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 KRT2P35908 639 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 ERVK-21P61565 698 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 TMEM62Q0P6H9 643 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 LCE5AQ5TCM9 118 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 PPP4R3AQ6IN85 833 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 PIK3AP1Q6ZUJ8 805 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 MIER3Q7Z3K6 550 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 KIAA0319LQ8IZA0 1049 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 LINC01465Q8N7H1 131 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 GDPD5Q8WTR4 605 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 LINC01599Q8WXQ3 324 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 TOP1MTQ969P6 601 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 FAM20AQ96MK3 541 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 CITED4Q96RK1 184 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 YME1L1Q96TA2 773 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 KIF2CQ99661 725 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 NAP1L4Q99733 375 aaKnown RBP7.9□□□□□ -1.14
YBX3-206ENST00000536823 CELF4Q9BZC1 486 aaKnown RBP7.9□□□□□ -1.14
YBX3-206ENST00000536823 AGO3Q9H9G7 860 aaKnown RBP7.9□□□□□ -1.14
YBX3-206ENST00000536823 CERS4Q9HA82 394 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 KCNMB3Q9NPA1 279 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 CEP131Q9UPN4 1083 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 LIMCH1Q9UPQ0 1083 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 XIRP2A4UGR9 3374 aa7.9□□□□□ -1.14
YBX3-206ENST00000536823 MUC3AQ02505 3323 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 RFXAPO00287 272 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 ZBTB39O15060 712 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 TBX3O15119 743 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 MAGEB2O15479 319 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 FZD6O60353 706 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 MMP1P03956 469 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 CLCN3P51790 818 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 PAK2Q13177 524 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 GRB10Q13322 594 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 PPP2R5CQ13362 524 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 TRIM29Q14134 588 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 SGO2Q562F6 1265 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 EARS2Q5JPH6 523 aaKnown RBP7.89□□□□□ -1.15
YBX3-206ENST00000536823 FAM43BQ6ZT52 329 aaPredicted RBP7.89□□□□□ -1.15
YBX3-206ENST00000536823 CCDC83Q8IWF9 413 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 DIS3L2Q8IYB7 885 aaKnown RBP7.89□□□□□ -1.15
YBX3-206ENST00000536823 KLHDC7BQ96G42 594 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 SPACA7Q96KW9 195 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 SAMD11Q96NU1 681 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 MAP7D2Q96T17 732 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 FTHL17Q9BXU8 183 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 RBCK1Q9BYM8 510 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 RC3H2Q9HBD1 1191 aaKnown RBP7.89□□□□□ -1.15
YBX3-206ENST00000536823 ERVK-5Q9HDB9 667 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 SH2B1Q9NRF2 756 aaPredicted RBP7.89□□□□□ -1.15
YBX3-206ENST00000536823 VAV3Q9UKW4 847 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 PADI3Q9ULW8 664 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 MTCH2Q9Y6C9 303 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 RALGAPA2Q2PPJ7 1873 aa7.89□□□□□ -1.15
YBX3-206ENST00000536823 NLRC5Q86WI3 1866 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 ADGRA3Q8IWK6 1321 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 ENPP3O14638 875 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 CCNT1O60563 726 aaKnown RBP7.88□□□□□ -1.15
YBX3-206ENST00000536823 LPXNO60711 386 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 GPR32O75388 356 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 VTNP04004 478 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 EPHA1P21709 976 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 TMOD1P28289 359 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 RBM25P49756 843 aaKnown RBP7.88□□□□□ -1.15
YBX3-206ENST00000536823 TARBP2Q15633 366 aaKnown RBP7.88□□□□□ -1.15
YBX3-206ENST00000536823 CCDC85BQ15834 202 aaPredicted RBP7.88□□□□□ -1.15
YBX3-206ENST00000536823 KIZQ2M2Z5 673 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 TMEM266Q2M3C6 531 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 XKR3Q5GH77 459 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 ODR4Q5SWX8 454 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 KRT40Q6A162 431 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 TRMT1LQ7Z2T5 733 aaKnown RBP7.88□□□□□ -1.15
YBX3-206ENST00000536823 TREML1Q86YW5 311 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 NPAS4Q8IUM7 802 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 LRRC71Q8N4P6 559 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 METTL13Q8N6R0 699 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 TMEM40Q8WWA1 233 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 PPM1EQ8WY54 764 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 HAS1Q92839 578 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 ZSCAN31Q96LW9 406 aaPredicted RBP7.88□□□□□ -1.15
YBX3-206ENST00000536823 ASB16Q96NS5 453 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 OSMRQ99650 979 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 LLPHQ9BRT6 129 aaKnown RBP7.88□□□□□ -1.15
YBX3-206ENST00000536823 C17orf80Q9BSJ5 609 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 RUSC1Q9BVN2 902 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 TMX1Q9H3N1 280 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 NRBP2Q9NSY0 501 aa7.88□□□□□ -1.15
YBX3-206ENST00000536823 LMCD1Q9NZU5 365 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms