RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 CBSLP0DN79 551 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 LSP1P33241 339 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 GTF2F1P35269 517 aaKnown RBP eCLIP3.58□□□□□ -1.84
SKA3-207ENST00000536239 CBSP35520 551 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 KPNA1P52294 538 aaPredicted RBP3.58□□□□□ -1.84
SKA3-207ENST00000536239 SOX10P56693 466 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 RBL2Q08999 1139 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 NAALADL2Q58DX5 795 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 TRMT2AQ8IZ69 625 aaKnown RBP3.58□□□□□ -1.84
SKA3-207ENST00000536239 VGLL2Q8N8G2 317 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 SSH3Q8TE77 659 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 PAWRQ96IZ0 340 aaKnown RBP3.58□□□□□ -1.84
SKA3-207ENST00000536239 MS4A5Q9H3V2 200 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 FAM30AQ9NZY2 134 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 USP25Q9UHP3 1055 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 KCNG1Q9UIX4 513 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 WNT10BO00744 389 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 PRSS23O95084 383 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 POMCP01189 267 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 ALOX15P16050 662 aaPredicted RBP3.57□□□□□ -1.84
SKA3-207ENST00000536239 MAPK10P53779 464 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 UBXN2BQ14CS0 331 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 LLGL1Q15334 1064 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 SF3B3Q15393 1217 aaKnown RBP3.57□□□□□ -1.84
SKA3-207ENST00000536239 MST1LQ2TV78 715 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 TSTD2Q5T7W7 516 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 KAZNQ674X7 775 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 FCRLBQ6BAA4 426 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 FRMD7Q6ZUT3 714 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 SPATA3Q8NHX4 192 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 ARMC5Q96C12 935 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 ZNF48Q96MX3 618 aaPredicted RBP3.57□□□□□ -1.84
SKA3-207ENST00000536239 MRI1Q9BV20 369 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 ADGRE3Q9BY15 652 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 WNT6Q9Y6F9 365 aa3.57□□□□□ -1.84
SKA3-207ENST00000536239 TRGV11A0A075B6L2 103 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 YY2O15391 372 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 MPPED1O15442 326 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 PRR35P0CG20 571 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 SLC6A2P23975 617 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 CCKBRP32239 447 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 GRIA3P42263 894 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 SP140Q13342 867 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 FHL1Q13642 323 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 TERF2Q15554 542 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 GEN1Q17RS7 908 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 AFMIDQ63HM1 303 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 ZNF626Q68DY1 528 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 PEG10Q86TG7 708 aaKnown RBP3.56□□□□□ -1.84
SKA3-207ENST00000536239 OR7D4Q8NG98 312 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 RPL36ALQ969Q0 106 aaKnown RBP3.56□□□□□ -1.84
SKA3-207ENST00000536239 MAGEC2Q9UBF1 373 aaPredicted RBP3.56□□□□□ -1.84
SKA3-207ENST00000536239 SIK3Q9Y2K2 1263 aa3.56□□□□□ -1.84
SKA3-207ENST00000536239 ZNF521Q96K83 1311 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 CNTNAP2Q9UHC6 1331 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 PPP1R12AO14974 1030 aaPredicted RBP3.55□□□□□ -1.84
SKA3-207ENST00000536239 RFPL3O75679 317 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 LPLP06858 475 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 ELFN1P0C7U0 828 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 CKBP12277 381 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 ADSLP30566 484 aaPredicted RBP3.55□□□□□ -1.84
SKA3-207ENST00000536239 FOXG1P55316 489 aaPredicted RBP3.55□□□□□ -1.84
SKA3-207ENST00000536239 LGALS4P56470 323 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 TUBA4AP68366 448 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 KLF9Q13886 244 aaPredicted RBP3.55□□□□□ -1.84
SKA3-207ENST00000536239 PITRM1Q5JRX3 1037 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 VWA1Q6PCB0 445 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 ZNF517Q6ZMY9 492 aaPredicted RBP3.55□□□□□ -1.84
SKA3-207ENST00000536239 AMIGO2Q86SJ2 522 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 HOMEZQ8IX15 550 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 SEMA6DQ8NFY4 1073 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 FBXO18Q8NFZ0 1043 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 RGMAQ96B86 450 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 WACQ9BTA9 647 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 KCTD10Q9H3F6 313 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 BCO1Q9HAY6 547 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 BTBD3Q9Y2F9 522 aa3.55□□□□□ -1.84
SKA3-207ENST00000536239 CACNA1IQ9P0X4 2223 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 AKR1B10O60218 316 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 KPNA6O60684 536 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 MOSPD3O75425 235 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 NTN1O95631 604 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 RAP2AP10114 183 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 SRGNP10124 158 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 ATP5JP18859 108 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 KELP23276 732 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 SREBF1P36956 1147 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 SCNN1BP51168 640 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 NEK4P51957 841 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 SLC10A2Q12908 348 aaPredicted RBP3.54□□□□□ -1.84
SKA3-207ENST00000536239 GRM1Q13255 1194 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 PABPC4Q13310 644 aaKnown RBP eCLIP3.54□□□□□ -1.84
SKA3-207ENST00000536239 SQSTM1Q13501 440 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 ETFDHQ16134 617 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 NBPF8Q3BBV2 869 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 RUSC1-AS1Q66K80 236 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 Q6ZVL8 140 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 Q8NA96 180 aa3.54□□□□□ -1.84
SKA3-207ENST00000536239 SMC1BQ8NDV3 1235 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms