RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 PTENP60484 403 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 KLRC3Q07444 240 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 TRAF1Q13077 416 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 PPP2R5CQ13362 524 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 DRP2Q13474 957 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 HLTFQ14527 1009 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS33A-203ENST00000536212 PLS1Q14651 629 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 KIF22Q14807 665 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 DRAP1Q14919 205 aaPredicted RBP6.19□□□□□ -1.42
VPS33A-203ENST00000536212 PLCB4Q15147 1175 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 PPP2R5AQ15172 486 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 CLUL1Q15846 466 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 ENOX2Q16206 610 aaKnown RBP6.19□□□□□ -1.42
VPS33A-203ENST00000536212 CERKLQ49MI3 558 aaPredicted RBP6.19□□□□□ -1.42
VPS33A-203ENST00000536212 SYDE2Q5VT97 1194 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 KCTD16Q68DU8 428 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 B3GNT9Q6UX72 402 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 MAATS1Q7Z4T9 603 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 TMC3Q7Z5M5 1100 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 NLRP14Q86W24 1093 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 ZFPM1Q8IX07 1006 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 FAM186BQ8IYM0 893 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 MICALL1Q8N3F8 863 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 PRPF38AQ8NAV1 312 aaKnown RBP6.19□□□□□ -1.42
VPS33A-203ENST00000536212 SLC43A3Q8NBI5 491 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 ATP8B4Q8TF62 1192 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 U2AF1L4Q8WU68 220 aaKnown RBP6.19□□□□□ -1.42
VPS33A-203ENST00000536212 KAT2BQ92831 832 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 RNF34Q969K3 372 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 TLCD1Q96CP7 247 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 CCT8L2Q96SF2 557 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 CEP89Q96ST8 783 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 STRA6Q9BX79 667 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 ZC3H12CQ9C0D7 883 aaKnown RBP6.19□□□□□ -1.42
VPS33A-203ENST00000536212 GPR88Q9GZN0 384 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 CARD9Q9H257 536 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 BHMT2Q9H2M3 363 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 CRISPLD1Q9H336 500 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 ZHX3Q9H4I2 956 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 CCSER2Q9H7U1 834 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 GPAMQ9HCL2 828 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 KCNQ5Q9NR82 932 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS33A-203ENST00000536212 KCND2Q9NZV8 630 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 GCNT4Q9P109 453 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 PI4KBQ9UBF8 816 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 AMFRQ9UKV5 643 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 ODF2LQ9ULJ1 636 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 USP20Q9Y2K6 914 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 RABGAP1Q9Y3P9 1069 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 COL2A1P02458 1487 aaPredicted RBP6.19□□□□□ -1.42
VPS33A-203ENST00000536212 MYH7BA7E2Y1 1941 aa6.19□□□□□ -1.42
VPS33A-203ENST00000536212 ATRNL1Q5VV63 1379 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 ARFGEF1Q9Y6D6 1849 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 GMNCA6NCL1 334 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 DDTLA6NHG4 134 aaPredicted RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 GOLGA6L10A6NI86 522 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 SPDYE3A6NKU9 549 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 TMCO5BA8MYB1 307 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 F8W031 263 aaPredicted RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 PMM2O15305 246 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 P4HA2O15460 535 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 TRAPPC3O43617 180 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 BUB1BO60566 1050 aaPredicted RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 TOM1O60784 492 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 ENTPD3O75355 529 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 MTA2O94776 668 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 SLITRK3O94933 977 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 F11P03951 625 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 NUDT17P0C025 328 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 CCDC172P0C7W6 258 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 MAPTP10636 758 aaKnown RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 ALAS1P13196 640 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 ITGA4P13612 1032 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 EPB42P16452 691 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 HSPA6P17066 643 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 GUCY2CP25092 1073 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 POLD1P28340 1107 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 HNRNPH1P31943 449 aaKnown RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 FLT3P36888 993 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 LIG3P49916 1009 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 DNA2P51530 1060 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 GUCY1A3Q02108 690 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 ICA1Q05084 483 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 NBPF9Q3BBW0 867 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 DCAF17Q5H9S7 520 aaPredicted RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 DCAF12L1Q5VU92 463 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 DUPD1Q68J44 220 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 TTC19Q6DKK2 380 aaPredicted RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 ALG1LQ6GMV1 187 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 GJB7Q6PEY0 223 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 KCNV1Q6PIU1 500 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 STXBP4Q6ZWJ1 553 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 OTOP1Q7RTM1 612 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 ZNF720Q7Z2F6 126 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 TAX1BP1Q86VP1 789 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 DDX42Q86XP3 938 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 C12orf56Q8IXR9 622 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 PGBD3Q8N328 593 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 OTUD6BQ8N6M0 293 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms