RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 GET4Q7L5D6 327 aaPredicted RBP14.38□□□□□ -0.11
RTN3-207ENST00000536011 DAW1Q8N136 415 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 ATOH1Q92858 354 aaPredicted RBP14.38□□□□□ -0.11
RTN3-207ENST00000536011 ACAP3Q96P50 834 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 CLSTN3Q9BQT9 956 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 NTPCRQ9BSD7 190 aaKnown RBP14.38□□□□□ -0.11
RTN3-207ENST00000536011 SMOC2Q9H3U7 446 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 POLD4Q9HCU8 107 aa14.38□□□□□ -0.11
RTN3-207ENST00000536011 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.38□□□□□ -0.11
RTN3-207ENST00000536011 SMIM28A0A1B0GU29 152 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 SLC16A4O15374 487 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 N4BP1O75113 896 aaKnown RBP14.37□□□□□ -0.11
RTN3-207ENST00000536011 TOM1L1O75674 476 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 POU2F2P09086 479 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 PLS3P13797 630 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 RFX1P22670 979 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 FSHRP23945 695 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 CLCNKBP51801 687 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 MAPK7Q13164 816 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 RAB33AQ14088 237 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 NOLC1Q14978 699 aaKnown RBP eCLIP14.37□□□□□ -0.115e-6■□□□□ 9.2
RTN3-207ENST00000536011 UVSSAQ2YD98 709 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 SYT2Q8N9I0 419 aaPredicted RBP14.37□□□□□ -0.11
RTN3-207ENST00000536011 FLCNQ8NFG4 579 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 FEZF2Q8TBJ5 459 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 SNX27Q96L92 541 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 RTP3Q9BQQ7 232 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 MMTAG2Q9BU76 263 aaKnown RBP14.37□□□□□ -0.11
RTN3-207ENST00000536011 TARS2Q9BW92 718 aaKnown RBP14.37□□□□□ -0.11
RTN3-207ENST00000536011 PTPRHQ9HD43 1115 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 LARSQ9P2J5 1176 aaKnown RBP14.37□□□□□ -0.11
RTN3-207ENST00000536011 MTRRQ9UBK8 725 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 WNT16Q9UBV4 365 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 BACE2Q9Y5Z0 518 aa14.37□□□□□ -0.11
RTN3-207ENST00000536011 PLA2G4BP0C869 781 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 SRFP11831 508 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 LAMP2P13473 410 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 KCNE1P15382 129 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 PROZP22891 400 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 RPL9P32969 192 aaKnown RBP14.36□□□□□ -0.11
RTN3-207ENST00000536011 OR1D2P34982 312 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 UBA7P41226 1012 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 OSTNP61366 133 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 XKR4Q5GH76 650 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 ZPBP2Q6X784 338 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 KCNK18Q7Z418 384 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 BRAPQ7Z569 592 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 SIX5Q8N196 739 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 TMEM105Q8N8V8 129 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 SLC7A14Q8TBB6 771 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 CALML4Q96GE6 196 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 MYADMQ96S97 322 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 CNTN3Q9P232 1028 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 ANKFY1Q9P2R3 1169 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 MYO15AQ9UKN7 3530 aa14.36□□□□□ -0.11
RTN3-207ENST00000536011 PODXLO00592 558 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 SYN3O14994 580 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 CLDN3O15551 220 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 HARSP12081 509 aaKnown RBP14.35□□□□□ -0.11
RTN3-207ENST00000536011 AOC1P19801 751 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 ABCD1P33897 745 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 RAD51AP2Q09MP3 1159 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 KYAT1Q16773 422 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 TMEM119Q4V9L6 283 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 AXDND1Q5T1B0 1012 aaPredicted RBP14.35□□□□□ -0.11
RTN3-207ENST00000536011 LARP1BQ659C4 914 aaKnown RBP14.35□□□□□ -0.11
RTN3-207ENST00000536011 ALKAL1Q6UXT8 129 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 MTSS1LQ765P7 747 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 TAS1R3Q7RTX0 852 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 GRASPQ7Z6J2 395 aaPredicted RBP14.35□□□□□ -0.11
RTN3-207ENST00000536011 CEP120Q8N960 986 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 TMEM161BQ8NDZ6 487 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 RASSF8Q8NHQ8 419 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 BICD1Q96G01 975 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 CXCL16Q9H2A7 254 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 CDH7Q9ULB5 785 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 ODF2LQ9ULJ1 636 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 POLIQ9UNA4 740 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 NUB1Q9Y5A7 615 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 CDY1Q9Y6F8 540 aa14.35□□□□□ -0.11
RTN3-207ENST00000536011 SFI1A8K8P3 1242 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 ANHXE9PGG2 379 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 H0Y858 1186 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 H7C4K7 107 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 MAPTP10636 758 aaKnown RBP14.34□□□□□ -0.11
RTN3-207ENST00000536011 PDCP20941 246 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 TKTP29401 623 aaKnown RBP14.34□□□□□ -0.11
RTN3-207ENST00000536011 ELF1P32519 619 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 MATR3P43243 847 aaKnown RBP eCLIP14.34□□□□□ -0.111e-6■■□□□ 13.3
RTN3-207ENST00000536011 SLC12A3P55017 1021 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 HTR4Q13639 388 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 SLC44A3Q8N4M1 653 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 TBC1D32Q96NH3 1257 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 PNMA5Q96PV4 448 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 GOLGA2P5Q9HBQ8 144 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 KCNH3Q9ULD8 1083 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 CITO14578 2027 aa14.34□□□□□ -0.11
RTN3-207ENST00000536011 VWA8A3KMH1 1905 aa14.33□□□□□ -0.11
RTN3-207ENST00000536011 STK25O00506 426 aa14.33□□□□□ -0.12
RTN3-207ENST00000536011 ABLIM1O14639 778 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms