RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 EIF3DO15371 548 aaKnown RBP eCLIP24.18■■□□□ 1.46
VPS37C-202ENST00000535818 FAM189A1O60320 539 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 ZNF202O95125 648 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 MYL1P05976 194 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 SRGAP2BP0DMP2 458 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 GLUD2P49448 558 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 ACOT2P49753 483 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 CLCNKBP51801 687 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 ADAM15Q13444 863 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 PTPN14Q15678 1187 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 ENOX2Q16206 610 aaKnown RBP24.18■■□□□ 1.46
VPS37C-202ENST00000535818 CTC1Q2NKJ3 1217 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 KRBA2Q6ZNG9 492 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 KIF12Q96FN5 646 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 CPSF3Q9UKF6 684 aaKnown RBP24.18■■□□□ 1.46
VPS37C-202ENST00000535818 SSX2IPQ9Y2D8 614 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 IRAK3Q9Y616 596 aa24.18■■□□□ 1.46
VPS37C-202ENST00000535818 TTC26A0AVF1 554 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 MEFVO15553 781 aaPredicted RBP24.17■■□□□ 1.46
VPS37C-202ENST00000535818 B3GAT3O94766 335 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 KCNQ1P51787 676 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 SOX4Q06945 474 aaPredicted RBP24.17■■□□□ 1.46
VPS37C-202ENST00000535818 SPAG1Q07617 926 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 USP41Q3LFD5 358 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 LLGL2Q6P1M3 1020 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 ARMCX5Q6P1M9 558 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 TAS1R1Q7RTX1 841 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 CCDC47Q96A33 483 aaKnown RBP24.17■■□□□ 1.46
VPS37C-202ENST00000535818 C18orf25Q96B23 403 aaPredicted RBP24.17■■□□□ 1.46
VPS37C-202ENST00000535818 DDX27Q96GQ7 796 aaKnown RBP24.17■■□□□ 1.46
VPS37C-202ENST00000535818 EMILIN2Q9BXX0 1053 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 GPR62Q9BZJ7 368 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 SLC39A2Q9NP94 309 aa24.17■■□□□ 1.46
VPS37C-202ENST00000535818 UBE4BO95155 1302 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 PRUNE2Q8WUY3 3088 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 LACTBL1A8MY62 500 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 XPOTO43592 962 aaKnown RBP24.16■■□□□ 1.46
VPS37C-202ENST00000535818 TBX10O75333 385 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 GARTP22102 1010 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 ADSSP30520 456 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 EHHADHQ08426 723 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 ELAVL2Q12926 359 aaKnown RBP24.16■■□□□ 1.46
VPS37C-202ENST00000535818 LEXMQ3ZCV2 418 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 DCLRE1AQ6PJP8 1040 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 CD302Q8IX05 232 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 RNF168Q8IYW5 571 aaPredicted RBP24.16■■□□□ 1.46
VPS37C-202ENST00000535818 NOC3LQ8WTT2 800 aaKnown RBP24.16■■□□□ 1.46
VPS37C-202ENST00000535818 REV3LO60673 3130 aa24.16■■□□□ 1.46
VPS37C-202ENST00000535818 PDCD11Q14690 1871 aaKnown RBP24.15■■□□□ 1.46
VPS37C-202ENST00000535818 TMEM189-UBE2V1I3L0A0 370 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 TULP1O00294 542 aaPredicted RBP24.15■■□□□ 1.46
VPS37C-202ENST00000535818 PODXLO00592 558 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 KLRC4O43908 158 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 CLASP2O75122 1294 aaKnown RBP24.15■■□□□ 1.46
VPS37C-202ENST00000535818 EFEMP2O95967 443 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 LDHAP00338 332 aaKnown RBP24.15■■□□□ 1.46
VPS37C-202ENST00000535818 LTBRP36941 435 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 DLX2Q07687 328 aaPredicted RBP24.15■■□□□ 1.46
VPS37C-202ENST00000535818 CLUL1Q15846 466 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 UPP1Q16831 310 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 KMT5BQ4FZB7 885 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 EPM2AIP1Q7L775 607 aaPredicted RBP24.15■■□□□ 1.46
VPS37C-202ENST00000535818 NELFCDQ8IXH7 590 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 ZNF507Q8TCN5 953 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 SAAL1Q96ER3 474 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 TUBGCP4Q9UGJ1 667 aa24.15■■□□□ 1.46
VPS37C-202ENST00000535818 BARX2Q9UMQ3 279 aaPredicted RBP24.15■■□□□ 1.46
VPS37C-202ENST00000535818 UBQLN1Q9UMX0 589 aaKnown RBP24.15■■□□□ 1.46
VPS37C-202ENST00000535818 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.15■■□□□ 1.46
VPS37C-202ENST00000535818 GLP2RO95838 553 aa24.14■■□□□ 1.45
VPS37C-202ENST00000535818 PRR29P0C7W0 189 aa24.14■■□□□ 1.45
VPS37C-202ENST00000535818 RPL9P32969 192 aaKnown RBP24.14■■□□□ 1.45
VPS37C-202ENST00000535818 RBM10P98175 930 aaKnown RBP24.14■■□□□ 1.45
VPS37C-202ENST00000535818 DSG1Q02413 1049 aa24.14■■□□□ 1.45
VPS37C-202ENST00000535818 FAM171A1Q5VUB5 890 aa24.14■■□□□ 1.45
VPS37C-202ENST00000535818 KANK3Q6NY19 840 aa24.14■■□□□ 1.45
VPS37C-202ENST00000535818 CEP57Q86XR8 500 aa24.14■■□□□ 1.45
VPS37C-202ENST00000535818 RIN2Q8WYP3 895 aaPredicted RBP24.14■■□□□ 1.45
VPS37C-202ENST00000535818 B3GALT6Q96L58 329 aa24.14■■□□□ 1.45
VPS37C-202ENST00000535818 CBWD1Q9BRT8 395 aa24.14■■□□□ 1.45
VPS37C-202ENST00000535818 FAM213AQ9BRX8 229 aa24.14■■□□□ 1.45
VPS37C-202ENST00000535818 PCIF1Q9H4Z3 704 aa24.14■■□□□ 1.45
VPS37C-202ENST00000535818 TRAPPC3O43617 180 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 RPN1P04843 607 aaKnown RBP24.13■■□□□ 1.45
VPS37C-202ENST00000535818 KLRC2P26717 231 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 PSMD2Q13200 908 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 JADE1Q6IE81 842 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 PPFIBP1Q86W92 1011 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 VN1R2Q8NFZ6 395 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 SCFD1Q8WVM8 642 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 CASP10Q92851 521 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 KLHL5Q96PQ7 755 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 TSPAN18Q96SJ8 248 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 ASB7Q9H672 318 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 CHST7Q9NS84 486 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 CD207Q9UJ71 328 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 NUB1Q9Y5A7 615 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 HCFC2Q9Y5Z7 792 aa24.13■■□□□ 1.45
VPS37C-202ENST00000535818 GOLGA8IPA6NC78 632 aa24.12■■□□□ 1.45
VPS37C-202ENST00000535818 GOLGA8JA6NMD2 632 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms