RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 F8W810 466 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 NRP1O14786 923 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 EXOC3O60645 756 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 LPXNO60711 386 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 FGF18O76093 207 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 IL18RAPO95256 599 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 ALDH2P05091 517 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 ITGB1P05556 798 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 NFICP08651 508 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 OR1G1P47890 313 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 PMS1P54277 932 aaKnown RBP13.1□□□□□ -0.31
CHD4-203ENST00000535717 STIM1Q13586 685 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 MYBPC2Q14324 1141 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 SNRNP35Q16560 246 aaKnown RBP13.1□□□□□ -0.31
CHD4-203ENST00000535717 NFIL3Q16649 462 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 JADE1Q6IE81 842 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 RBM43Q6ZSC3 357 aaKnown RBP13.1□□□□□ -0.31
CHD4-203ENST00000535717 CD302Q8IX05 232 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 TMEM130Q8N3G9 435 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 RDH13Q8NBN7 331 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 UBE2Q2Q8WVN8 375 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 RABGGTAQ92696 567 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 DHTKD1Q96HY7 919 aaPredicted RBP13.1□□□□□ -0.31
CHD4-203ENST00000535717 PAAF1Q9BRP4 392 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 ASB7Q9H672 318 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 GOLGA2P5Q9HBQ8 144 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 ALG13Q9NP73 1137 aaKnown RBP13.1□□□□□ -0.31
CHD4-203ENST00000535717 SLC38A7Q9NVC3 462 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 MTMR10Q9NXD2 777 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 TMEM63CQ9P1W3 806 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 TUBGCP4Q9UGJ1 667 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 FAN1Q9Y2M0 1017 aa13.1□□□□□ -0.31
CHD4-203ENST00000535717 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
CHD4-203ENST00000535717 PDCD11Q14690 1871 aaKnown RBP13.1□□□□□ -0.31
CHD4-203ENST00000535717 COL4A4P53420 1690 aaPredicted RBP13.09□□□□□ -0.31
CHD4-203ENST00000535717 CARNS1A5YM72 827 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 PSMA7O14818 248 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 GRM6O15303 877 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 NR2F2P24468 414 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 CCNE1P24864 410 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 DNAJB1P25685 340 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 PPM1AP35813 382 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 PPP1R2P41236 205 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 CASP4P49662 377 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 PLCB3Q01970 1234 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 TMEM132DQ14C87 1099 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 EDRF1Q3B7T1 1238 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 CCDC183Q5T5S1 534 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 ANKRD40Q6AI12 368 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 KLHL10Q6JEL2 608 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 EFCAB13Q8IY85 973 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 SPPL3Q8TCT6 385 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 IGSF21Q96ID5 467 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 GUCD1Q96NT3 240 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 TSPAN18Q96SJ8 248 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 CDX2Q99626 313 aaPredicted RBP13.09□□□□□ -0.31
CHD4-203ENST00000535717 PDE11AQ9HCR9 933 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 MARCH5Q9NX47 278 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 DERAQ9Y315 318 aa13.09□□□□□ -0.31
CHD4-203ENST00000535717 PLXNA4Q9HCM2 1894 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 REV3LO60673 3130 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 TRIM49BA6NDI0 452 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
CHD4-203ENST00000535717 CYP3A5P20815 502 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 PTMSP20962 102 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 IGFBP6P24592 240 aaPredicted RBP13.08□□□□□ -0.32
CHD4-203ENST00000535717 RPL13P26373 211 aaKnown RBP13.08□□□□□ -0.32
CHD4-203ENST00000535717 CLCNKBP51801 687 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 GUCY2FP51841 1108 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 CYP24A1Q07973 514 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 ADAM9Q13443 819 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 CAMK1Q14012 370 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 ADGRE1Q14246 886 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 HSP90AA2PQ14568 343 aaPredicted RBP13.08□□□□□ -0.32
CHD4-203ENST00000535717 UPP1Q16831 310 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 SPATA1Q5VX52 437 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 CAVIN1Q6NZI2 390 aaKnown RBP13.08□□□□□ -0.32
CHD4-203ENST00000535717 NELFBQ8WX92 580 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 MYLIPQ8WY64 445 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 EEF2KMTQ96G04 330 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 MFSD14AQ96MC6 490 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 UROC1Q96N76 676 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 TSG101Q99816 390 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 COLEC11Q9BWP8 271 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 VN1R3Q9BXE9 311 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 GZF1Q9H116 711 aaPredicted RBP13.08□□□□□ -0.32
CHD4-203ENST00000535717 UBQLN1Q9UMX0 589 aaKnown RBP13.08□□□□□ -0.32
CHD4-203ENST00000535717 CTNND2Q9UQB3 1225 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 C2CD2Q9Y426 696 aa13.08□□□□□ -0.32
CHD4-203ENST00000535717 AKAP3O75969 853 aa13.07□□□□□ -0.32
CHD4-203ENST00000535717 KIF4AO95239 1232 aa13.07□□□□□ -0.32
CHD4-203ENST00000535717 HOXD11P31277 338 aaPredicted RBP13.07□□□□□ -0.32
CHD4-203ENST00000535717 RPL9P32969 192 aaKnown RBP13.07□□□□□ -0.32
CHD4-203ENST00000535717 NLRP12P59046 1061 aa13.07□□□□□ -0.32
CHD4-203ENST00000535717 KRT17Q04695 432 aa13.07□□□□□ -0.32
CHD4-203ENST00000535717 UBE3AQ05086 875 aa13.07□□□□□ -0.32
CHD4-203ENST00000535717 LRRC63Q05C16 580 aa13.07□□□□□ -0.32
CHD4-203ENST00000535717 PSMD6Q15008 389 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms