RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ARL8AQ96BM9 186 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 NUDT11Q96G61 164 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 TEKT5Q96M29 485 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 MAP3K14Q99558 947 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 TRIM8Q9BZR9 551 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 BCO1Q9HAY6 547 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 VTA1Q9NP79 307 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 STK26Q9P289 416 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 DNAI1Q9UI46 699 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 DNM3Q9UQ16 869 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 CTDP1Q9Y5B0 961 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-202ENST00000535689 SBF2Q86WG5 1849 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 ARID1BQ8NFD5 2236 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-202ENST00000535689 CAMTA1Q9Y6Y1 1673 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 DLC1Q96QB1 1528 aa4.15□□□□□ -1.75
SNHG1-202ENST00000535689 ROCK1Q13464 1354 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 DHX57Q6P158 1386 aaKnown RBP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 MAP3K5Q99683 1374 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 CYP27B1O15528 508 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 TSPAN6O43657 245 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 B4GALT4O60513 344 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 ALDH1A2O94788 518 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 LY86O95711 162 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 GAAP10253 952 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 MCAMP43121 646 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 KIF23Q02241 960 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 MGAT2Q10469 447 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 TCIRG1Q13488 830 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 RAB39AQ14964 217 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 PCBP2Q15366 365 aaKnown RBP eCLIP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 UAP1L1Q3KQV9 507 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 IFIT1BQ5T764 474 aaKnown RBP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 SLFN13Q68D06 897 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 CCSAPQ6IQ19 270 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 UNQ6494/PRO21346Q6UXR6 183 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 CLEC14AQ86T13 490 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 RSPH3Q86UC2 560 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 WDR75Q8IWA0 830 aaKnown RBP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 CMTM4Q8IZR5 234 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 RIN2Q8WYP3 895 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 JADE3Q92613 823 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 NKD2Q969F2 451 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 MTFMTQ96DP5 389 aaKnown RBP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 CLIP3Q96DZ5 547 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 C1GALT1C1Q96EU7 318 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 MPHOSPH9Q99550 1183 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 EPC1Q9H2F5 836 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 C12orf65Q9H3J6 166 aaKnown RBP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 SEMA4AQ9H3S1 761 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 FAM204AQ9H8W3 233 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 C1orf112Q9NSG2 853 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 POGKQ9P215 609 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 KLHL42Q9P2K6 505 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 EVLQ9UI08 416 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-202ENST00000535689 TMPRSS11EQ9UL52 423 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 PLA2G2DQ9UNK4 145 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 HDAC5Q9UQL6 1122 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 PCDHGA2Q9Y5H1 932 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 FMN2Q9NZ56 1722 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 ZNF536O15090 1300 aa4.14□□□□□ -1.75
SNHG1-202ENST00000535689 THSD7AQ9UPZ6 1657 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 NRAPQ86VF7 1730 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 A0A1W2PR48 441 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 EXOC5O00471 708 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 LAMTOR5O43504 91 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 MFAP3LO75121 409 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 IPO13O94829 963 aaKnown RBP4.13□□□□□ -1.75
SNHG1-202ENST00000535689 KRT1P04264 644 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 KRT18P05783 430 aaKnown RBP4.13□□□□□ -1.75
SNHG1-202ENST00000535689 OSMP13725 252 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 STAT5BP51692 787 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 RRADP55042 308 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 BPIFB4P59827 614 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 JAG1P78504 1218 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 ADAM15Q13444 863 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 TRIM25Q14258 630 aaKnown RBP4.13□□□□□ -1.75
SNHG1-202ENST00000535689 MLC1Q15049 377 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 NOMO1Q15155 1222 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 CCDC157Q569K6 752 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 NT5DC1Q5TFE4 455 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 FRMD5Q7Z6J6 570 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 ADGRE4PQ86SQ3 457 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 SLC41A1Q8IVJ1 513 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 DRC7Q8IY82 874 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 NLGN4YQ8NFZ3 816 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-202ENST00000535689 OR5M3Q8NGP4 307 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 CASKIN2Q8WXE0 1202 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 TCF25Q9BQ70 676 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 SPATA25Q9BR10 227 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 SENP6Q9GZR1 1112 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-202ENST00000535689 REXO4Q9GZR2 422 aaKnown RBP4.13□□□□□ -1.75
SNHG1-202ENST00000535689 CNNM1Q9NRU3 951 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 LANCL2Q9NS86 450 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 TDP1Q9NUW8 608 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 CALCOCO1Q9P1Z2 691 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-202ENST00000535689 CNOT11Q9UKZ1 510 aaKnown RBP4.13□□□□□ -1.75
SNHG1-202ENST00000535689 RBM8AQ9Y5S9 174 aaKnown RBP4.13□□□□□ -1.75
SNHG1-202ENST00000535689 UTRNP46939 3433 aa4.13□□□□□ -1.75
SNHG1-202ENST00000535689 OVOS2A0A0G2JMS6 1433 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms