RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SHROOM4Q9ULL8 1493 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 WNT10BO00744 389 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 ZNF185O15231 689 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 NDUFA10O95299 355 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 AMY1AP04745 511 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 NR4A1P22736 598 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 RECQLP46063 649 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-205ENST00000535375 MTM1Q13496 603 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 UAP1L1Q3KQV9 507 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 PDCD4Q53EL6 469 aaKnown RBP6.75□□□□□ -1.33
PRKDC-205ENST00000535375 BRDTQ58F21 947 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-205ENST00000535375 FAM102AQ5T9C2 384 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-205ENST00000535375 TSHZ3Q63HK5 1081 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 LRRC55Q6ZSA7 311 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 SEM1Q6ZVN7 128 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 UBE3BQ7Z3V4 1068 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 MRGPREQ86SM8 312 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 MIER2Q8N344 545 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 ZGPATQ8N5A5 531 aaKnown RBP6.75□□□□□ -1.33
PRKDC-205ENST00000535375 LARP4BQ92615 738 aaKnown RBP6.75□□□□□ -1.33
PRKDC-205ENST00000535375 GPATCH3Q96I76 525 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 TMX3Q96JJ7 454 aa6.75□□□□□ -1.33
PRKDC-205ENST00000535375 TMEM191CA6NGB0 347 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 CCDC154A6NI56 674 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 FZD9O00144 591 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 KIAA0391O15091 583 aaKnown RBP6.74□□□□□ -1.33
PRKDC-205ENST00000535375 FAM189BP81408 668 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 CDC42EP1Q00587 391 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 AGAP9Q5VTM2 703 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 AMER2Q8N7J2 671 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 MYEOVQ96EZ4 313 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 MYOCQ99972 504 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 FAM30AQ9NZY2 134 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 SLC23A1Q9UHI7 598 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 FPGT-TNNI3KV9GXZ4 949 aa6.74□□□□□ -1.33
PRKDC-205ENST00000535375 HTRA2O43464 458 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-205ENST00000535375 ADKP55263 362 aaKnown RBP6.73□□□□□ -1.33
PRKDC-205ENST00000535375 CTXN1P60606 82 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 IGBP1P78318 339 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 ATP8B2P98198 1209 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 SPDYE7PQ495Y7 208 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 ZBTB46Q86UZ6 589 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 RHOT2Q8IXI1 618 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 NLGN4YQ8NFZ3 816 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-205ENST00000535375 OR56A1Q8NGH5 318 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 RAB24Q969Q5 203 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 COA7Q96BR5 231 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 PRRX2Q99811 253 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 TEX101Q9BY14 249 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 C11orf54Q9H0W9 315 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-205ENST00000535375 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-205ENST00000535375 LIMCH1Q9UPQ0 1083 aa6.73□□□□□ -1.33
PRKDC-205ENST00000535375 TCRBV7S2A1N4TA0A589 114 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 INHBCP55103 352 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 EXOSC10Q01780 885 aaKnown RBP6.72□□□□□ -1.33
PRKDC-205ENST00000535375 DPTQ07507 201 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 IL10RAQ13651 578 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 ODF1Q14990 250 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 FOXR2Q6PJQ5 311 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 GADL1Q6ZQY3 521 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 RHOUQ7L0Q8 258 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 ULK2Q8IYT8 1036 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 FITM2Q8N6M3 262 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 CPEB3Q8NE35 698 aaKnown RBP6.72□□□□□ -1.33
PRKDC-205ENST00000535375 CLPTM1LQ96KA5 538 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 CEP89Q96ST8 783 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 RNPEPQ9H4A4 650 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 GSTO2Q9H4Y5 243 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 IPPQ9Y573 584 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 NOX1Q9Y5S8 564 aa6.72□□□□□ -1.33
PRKDC-205ENST00000535375 SGTAO43765 313 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 MTHFD1P11586 935 aaKnown RBP6.71□□□□□ -1.34
PRKDC-205ENST00000535375 DDX6P26196 483 aaKnown RBP eCLIP6.71□□□□□ -1.34
PRKDC-205ENST00000535375 BMPR1AP36894 532 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 GUCY1B3Q02153 619 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 RESTQ13127 1097 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 TARDBPQ13148 414 aaKnown RBP eCLIP6.71□□□□□ -1.34
PRKDC-205ENST00000535375 BEAN1Q3B7T3 259 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 C3orf36Q3SXR2 165 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 METRNLQ641Q3 311 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 ARMC6Q6NXE6 501 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 ZNF627Q7L945 461 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 MAPKAPK5Q8IW41 473 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 NEU1Q99519 415 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 TTPALQ9BTX7 342 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 MLST8Q9BVC4 326 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 CYP4F11Q9HBI6 524 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 MAN1C1Q9NR34 630 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 AASDHPPTQ9NRN7 309 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 FBXO34Q9NWN3 711 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 RNF181Q9P0P0 153 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 ANKFY1Q9P2R3 1169 aa6.71□□□□□ -1.34
PRKDC-205ENST00000535375 WDR33Q9C0J8 1336 aaKnown RBP6.71□□□□□ -1.34
PRKDC-205ENST00000535375 A0A1B0GTW7 788 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 TMEM200CA6NKL6 621 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 RAMP2O60895 175 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 CKBP12277 381 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 SLC6A2P23975 617 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 ZFP36P26651 326 aaKnown RBP6.7□□□□□ -1.34
PRKDC-205ENST00000535375 RAB39AQ14964 217 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms