RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 DAGLAQ9Y4D2 1042 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 ZNF521Q96K83 1311 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 TNS3Q68CZ2 1445 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 POLRMTO00411 1230 aaKnown RBP19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 RPS6KA5O75582 802 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 ACOT2P49753 483 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 PKN3Q6P5Z2 889 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 SEPT8Q92599 483 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 MUC3BQ9H195 1237 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 MAGEB2O15479 319 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 CCDC22O60826 627 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 STKLD1Q8NE28 680 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 OTULINQ96BN8 352 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 ZNF512Q96ME7 567 aaPredicted RBP19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 CRAMP1Q96RY5 1269 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 A0A1W2PQC6 194 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 ITGA4P13612 1032 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 CYP2B6P20813 491 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 IL31Q6EBC2 164 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 PDGFRAP16234 1089 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 STOML1Q9UBI4 398 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 CD4P01730 458 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 IRF1P10914 325 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 CYP2C19P33261 490 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 ARHGEF7Q14155 803 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 SRBD1Q8N5C6 995 aaKnown RBP19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 USP33Q8TEY7 942 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 GTF3C2Q8WUA4 911 aaPredicted RBP19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 NSUN4Q96CB9 384 aaKnown RBP19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 AGAP3Q96P47 875 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 SLC38A7Q9NVC3 462 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 KLHL11Q9NVR0 708 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 MTMR4Q9NYA4 1195 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 TEX33O43247 280 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 DAB2P98082 770 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 ANKMY2Q8IV38 441 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 YY1AP1Q9H869 796 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 SH3BP1Q9Y3L3 701 aa19.13■□□□□ 0.65
SFSWAP-203ENST00000535236 SUPT3HO75486 399 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 FOXO4P98177 505 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 KCNB1Q14721 858 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 TRADDQ15628 312 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 SGSM1Q2NKQ1 1148 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 ATL2Q8NHH9 583 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 CLMNQ96JQ2 1002 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 SLC30A1Q9Y6M5 507 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 GMNCA6NCL1 334 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 C5orf58C9J3I9 102 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 COBLL1Q53SF7 1204 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 DCP1BQ8IZD4 617 aaKnown RBP19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 STX19Q8N4C7 294 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 UNC45AQ9H3U1 944 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 ZNF543Q08ER8 600 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 LAMB3Q13751 1172 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 FAM117BQ6P1L5 589 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 PDGFRBP09619 1106 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 IL10P22301 178 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 LRRC14Q15048 493 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 TSPAN17Q96FV3 270 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 RNPC3Q96LT9 517 aaKnown RBP19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 SPATA31E1Q6ZUB1 1445 aa19.12■□□□□ 0.65
SFSWAP-203ENST00000535236 ABCE1P61221 599 aaKnown RBP19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 CUL3Q13618 768 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 NCOA4Q13772 614 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 EMC2Q15006 297 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 PABPC5Q96DU9 382 aaKnown RBP19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 SENP7Q9BQF6 1050 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 TSPOAP1O95153 1857 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 EEF2KO00418 725 aaKnown RBP19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 ARIH2O95376 493 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 SPDYAQ5MJ70 313 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 CEP70Q8NHQ1 597 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 ZNF507Q8TCN5 953 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 HDAC6Q9UBN7 1215 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 FLT1P17948 1338 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 NDUFS3O75489 264 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 RFC5P40937 340 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 ANO5Q75V66 913 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 KDM6AO15550 1401 aaPredicted RBP19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 CRB1P82279 1406 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 ANGPT2O15123 496 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 NDUFB10O96000 172 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 TMEM62Q0P6H9 643 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 MED21Q13503 144 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 GLB1LQ6UWU2 654 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 ARL8AQ96BM9 186 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 ARHGEF38Q9NXL2 777 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 ZNF70Q9UC06 446 aaPredicted RBP19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 ADGRG1Q9Y653 693 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 GRIN3BO60391 1043 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 ENTPD3O75355 529 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 STAT4Q14765 748 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 CATSPER3Q86XQ3 398 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 CPA5Q8WXQ8 436 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 KIF2CQ99661 725 aa19.11■□□□□ 0.65
SFSWAP-203ENST00000535236 NR3C2P08235 984 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 GYS2P54840 703 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 C16orf87Q6PH81 154 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 APEX2Q9UBZ4 518 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 MEFVO15553 781 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms