RNA–Protein interactions for RNA: ENST00000535140.1

OTUB1-205, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-205ENST00000535140 UPP1Q16831 310 aa20.28■□□□□ 0.84
OTUB1-205ENST00000535140 ZNF568Q3ZCX4 644 aa20.28■□□□□ 0.84
OTUB1-205ENST00000535140 PABPC1LQ4VXU2 614 aaKnown RBP20.28■□□□□ 0.84
OTUB1-205ENST00000535140 CD300LGQ6UXG3 332 aa20.28■□□□□ 0.84
OTUB1-205ENST00000535140 APBB1IPQ7Z5R6 666 aaPredicted RBP20.28■□□□□ 0.84
OTUB1-205ENST00000535140 FBXO18Q8NFZ0 1043 aa20.28■□□□□ 0.84
OTUB1-205ENST00000535140 UROC1Q96N76 676 aa20.28■□□□□ 0.84
OTUB1-205ENST00000535140 LLPHQ9BRT6 129 aaKnown RBP20.28■□□□□ 0.84
OTUB1-205ENST00000535140 CDT1Q9H211 546 aa20.28■□□□□ 0.84
OTUB1-205ENST00000535140 PPP4R2Q9NY27 417 aa20.28■□□□□ 0.84
OTUB1-205ENST00000535140 DNMT3BQ9UBC3 853 aaKnown RBP20.28■□□□□ 0.84
OTUB1-205ENST00000535140 NOL7Q9UMY1 257 aaKnown RBP20.28■□□□□ 0.84
OTUB1-205ENST00000535140 TNFSF13BQ9Y275 285 aa20.28■□□□□ 0.84
OTUB1-205ENST00000535140 PHLPP2Q6ZVD8 1323 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 VPS13AQ96RL7 3174 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 SMIM28A0A1B0GU29 152 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 E9PMD0 336 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 LMNAP02545 664 aaKnown RBP20.27■□□□□ 0.84
OTUB1-205ENST00000535140 YARSP54577 528 aaKnown RBP20.27■□□□□ 0.84
OTUB1-205ENST00000535140 PEX3P56589 373 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 STARD6P59095 220 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 ANKS3Q6ZW76 656 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 NPAS3Q8IXF0 933 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 C4orf32Q8N8J7 132 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 FAM184AQ8NB25 1140 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 SHDQ96IW2 340 aa20.27■□□□□ 0.84
OTUB1-205ENST00000535140 CCDC94Q9BW85 323 aaPredicted RBP20.27■□□□□ 0.84
OTUB1-205ENST00000535140 NOTCH4Q99466 2003 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 MIA3Q5JRA6 1907 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 PP2D1A8MPX8 630 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 TRAPPC3O43617 180 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 GRM5P41594 1212 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 ID4P47928 161 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 NPTX2P47972 431 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 TRAPPC10P48553 1259 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 MLF2Q15773 248 aaPredicted RBP20.26■□□□□ 0.83
OTUB1-205ENST00000535140 UVSSAQ2YD98 709 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 C1orf210Q8IVY1 113 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 ACO2Q99798 780 aaKnown RBP20.26■□□□□ 0.83
OTUB1-205ENST00000535140 TOPORSQ9NS56 1045 aaPredicted RBP20.26■□□□□ 0.83
OTUB1-205ENST00000535140 MRPS23Q9Y3D9 190 aaKnown RBP20.26■□□□□ 0.83
OTUB1-205ENST00000535140 BACE2Q9Y5Z0 518 aa20.26■□□□□ 0.83
OTUB1-205ENST00000535140 HIP1RO75146 1068 aa20.25■□□□□ 0.83
OTUB1-205ENST00000535140 POU2F2P09086 479 aa20.25■□□□□ 0.83
OTUB1-205ENST00000535140 SP9P0CG40 484 aa20.25■□□□□ 0.83
OTUB1-205ENST00000535140 HMGN5P82970 282 aaKnown RBP20.25■□□□□ 0.83
OTUB1-205ENST00000535140 ROR1Q01973 937 aa20.25■□□□□ 0.83
OTUB1-205ENST00000535140 PTGDRQ13258 359 aa20.25■□□□□ 0.83
OTUB1-205ENST00000535140 SLC5A9Q2M3M2 681 aa20.25■□□□□ 0.83
OTUB1-205ENST00000535140 DAW1Q8N136 415 aa20.25■□□□□ 0.83
OTUB1-205ENST00000535140 TARS2Q9BW92 718 aaKnown RBP20.25■□□□□ 0.83
OTUB1-205ENST00000535140 SEMA4AQ9H3S1 761 aa20.25■□□□□ 0.83
OTUB1-205ENST00000535140 PCDHB6Q9Y5E3 794 aa20.25■□□□□ 0.83
OTUB1-205ENST00000535140 DMDP11532 3685 aa20.25■□□□□ 0.83
OTUB1-205ENST00000535140 KANSL1LA0AUZ9 987 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 PODXLO00592 558 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 EIF5BO60841 1220 aaKnown RBP20.24■□□□□ 0.83
OTUB1-205ENST00000535140 RHOP08100 348 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 HARSP12081 509 aaKnown RBP20.24■□□□□ 0.83
OTUB1-205ENST00000535140 CD72P21854 359 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 ARPP19P56211 112 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 DMP1Q13316 513 aaPredicted RBP20.24■□□□□ 0.83
OTUB1-205ENST00000535140 UBXN2BQ14CS0 331 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 SLC44A4Q53GD3 710 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 ZC3H14Q6PJT7 736 aaKnown RBP20.24■□□□□ 0.83
OTUB1-205ENST00000535140 TAS1R3Q7RTX0 852 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 IGSF22Q8N9C0 903 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 MCRS1Q96EZ8 462 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 ZMAT2Q96NC0 199 aaKnown RBP20.24■□□□□ 0.83
OTUB1-205ENST00000535140 RUSC1Q9BVN2 902 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 MRPL4Q9BYD3 311 aaKnown RBP20.24■□□□□ 0.83
OTUB1-205ENST00000535140 RAB34Q9BZG1 259 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 PTPRHQ9HD43 1115 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 KMT5AQ9NQR1 393 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 KCNH3Q9ULD8 1083 aa20.24■□□□□ 0.83
OTUB1-205ENST00000535140 MTF2Q9Y483 593 aaPredicted RBP20.24■□□□□ 0.83
OTUB1-205ENST00000535140 WDR27A2RRH5 827 aa20.23■□□□□ 0.83
OTUB1-205ENST00000535140 CDC25AP30304 524 aa20.23■□□□□ 0.83
OTUB1-205ENST00000535140 TOB1P50616 345 aaPredicted RBP20.23■□□□□ 0.83
OTUB1-205ENST00000535140 FOXK2Q01167 660 aa20.23■□□□□ 0.83
OTUB1-205ENST00000535140 PDIA5Q14554 519 aa20.23■□□□□ 0.83
OTUB1-205ENST00000535140 VARS2Q5ST30 1063 aaKnown RBP20.23■□□□□ 0.83
OTUB1-205ENST00000535140 ALKAL1Q6UXT8 129 aa20.23■□□□□ 0.83
OTUB1-205ENST00000535140 HINFPQ9BQA5 517 aa20.23■□□□□ 0.83
OTUB1-205ENST00000535140 TCHPQ9BT92 498 aa20.23■□□□□ 0.83
OTUB1-205ENST00000535140 SLC38A7Q9NVC3 462 aa20.23■□□□□ 0.83
OTUB1-205ENST00000535140 ARHGAP28Q9P2N2 729 aa20.23■□□□□ 0.83
OTUB1-205ENST00000535140 DNM3Q9UQ16 869 aa20.23■□□□□ 0.83
OTUB1-205ENST00000535140 EP300Q09472 2414 aaPredicted RBP20.23■□□□□ 0.83
OTUB1-205ENST00000535140 CACNA1IQ9P0X4 2223 aa20.22■□□□□ 0.83
OTUB1-205ENST00000535140 PRRG1O14668 218 aa20.22■□□□□ 0.83
OTUB1-205ENST00000535140 SLC16A4O15374 487 aa20.22■□□□□ 0.83
OTUB1-205ENST00000535140 LRG1P02750 347 aa20.22■□□□□ 0.83
OTUB1-205ENST00000535140 CEBPBP17676 345 aa20.22■□□□□ 0.83
OTUB1-205ENST00000535140 ELF1P32519 619 aa20.22■□□□□ 0.83
OTUB1-205ENST00000535140 PFKPQ01813 784 aa20.22■□□□□ 0.83
OTUB1-205ENST00000535140 PRKCQQ04759 706 aa20.22■□□□□ 0.83
OTUB1-205ENST00000535140 MAPK7Q13164 816 aa20.22■□□□□ 0.83
OTUB1-205ENST00000535140 XKR4Q5GH76 650 aa20.22■□□□□ 0.83
OTUB1-205ENST00000535140 KRT79Q5XKE5 535 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms