RNA–Protein interactions for RNA: ENST00000535041.5

LRTM2-202, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM2, Length 3,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-202ENST00000535041 KCTD2Q14681 263 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 KIF22Q14807 665 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 BRDTQ58F21 947 aaPredicted RBP13.2□□□□□ -0.3
LRTM2-202ENST00000535041 USP37Q86T82 979 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 CCDC105Q8IYK2 499 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 C1orf54Q8WWF1 131 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 KLC4Q9NSK0 619 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 RNF14Q9UBS8 474 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 UTP11Q9Y3A2 253 aaKnown RBP13.2□□□□□ -0.3
LRTM2-202ENST00000535041 GOLGA6L10A0A0M3HER8 536 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 CLDN3O15551 220 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 THAP12O43422 761 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 CTNNA1P35221 906 aaKnown RBP13.2□□□□□ -0.3
LRTM2-202ENST00000535041 IFFO1Q0D2I5 559 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 FAM182AQ5T1J6 154 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 C9orf131Q5VYM1 1079 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 TAB3Q8N5C8 712 aaPredicted RBP13.2□□□□□ -0.3
LRTM2-202ENST00000535041 HELQQ8TDG4 1101 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 ACSF2Q96CM8 615 aaPredicted RBP13.2□□□□□ -0.3
LRTM2-202ENST00000535041 CYFIP2Q96F07 1278 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 MAP3K20Q9NYL2 800 aaKnown RBP13.2□□□□□ -0.3
LRTM2-202ENST00000535041 SUCLA2Q9P2R7 463 aaPredicted RBP13.2□□□□□ -0.3
LRTM2-202ENST00000535041 RRM1P23921 792 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 MAPK4P31152 587 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 IREB2P48200 963 aaKnown RBP13.2□□□□□ -0.3
LRTM2-202ENST00000535041 DHX9Q08211 1270 aaKnown RBP13.2□□□□□ -0.3
LRTM2-202ENST00000535041 NNTQ13423 1086 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 SEL1L2Q5TEA6 688 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 TDRD10Q5VZ19 366 aaKnown RBP13.2□□□□□ -0.3
LRTM2-202ENST00000535041 EMBQ6PCB8 327 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 LBX2Q6XYB7 198 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 UBL4BQ8N7F7 174 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 CCDC26Q8TAB7 109 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 ATG4AQ8WYN0 398 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 SGSM3Q96HU1 749 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 HAPLN2Q9GZV7 340 aa13.2□□□□□ -0.3
LRTM2-202ENST00000535041 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 CHUKO15111 745 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 RTN2O75298 545 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 STBD1O95210 358 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 WEE2P0C1S8 567 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 OLIG1Q8TAK6 271 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 TAF1DQ9H5J8 278 aaPredicted RBP13.19□□□□□ -0.3
LRTM2-202ENST00000535041 NRBP2Q9NSY0 501 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 KIAA1217Q5T5P2 1943 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 SYNGAP1Q96PV0 1343 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 GOLGA6L10A6NI86 522 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 MAFGO15525 162 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 PYGMP11217 842 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 CD19P15391 556 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 DR1Q01658 176 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 CAPSQ13938 189 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 NFIL3Q16649 462 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 KAZNQ674X7 775 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 FAM71AQ8IYT1 594 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 CCDC114Q96M63 670 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 MTMR12Q9C0I1 747 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 VIPAS39Q9H9C1 493 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
LRTM2-202ENST00000535041 ZC3H4Q9UPT8 1303 aaKnown RBP13.19□□□□□ -0.3
LRTM2-202ENST00000535041 MEFVO15553 781 aaPredicted RBP13.18□□□□□ -0.3
LRTM2-202ENST00000535041 FARP2O94887 1054 aaPredicted RBP13.18□□□□□ -0.3
LRTM2-202ENST00000535041 NSFP46459 744 aaKnown RBP13.18□□□□□ -0.3
LRTM2-202ENST00000535041 SHC3Q92529 594 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 OPTNQ96CV9 577 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 TBC1D31Q96DN5 1066 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 HES6Q96HZ4 224 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 PPANQ9NQ55 473 aaKnown RBP13.18□□□□□ -0.3
LRTM2-202ENST00000535041 ATAD5Q96QE3 1844 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 MYH9P35579 1960 aaKnown RBP13.18□□□□□ -0.3
LRTM2-202ENST00000535041 O00370 1275 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 DDX3YO15523 660 aaKnown RBP13.18□□□□□ -0.3
LRTM2-202ENST00000535041 B4GALT5O43286 388 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 OPA1O60313 960 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 TXNP10599 105 aaKnown RBP13.18□□□□□ -0.3
LRTM2-202ENST00000535041 SLCO1A2P46721 670 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 PPATQ06203 517 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 TTMPQ5BVD1 217 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 RHOT2Q8IXI1 618 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 PCYT2Q99447 389 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 IMPG2Q9BZV3 1241 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 NOCTQ9UK39 431 aaKnown RBP13.18□□□□□ -0.3
LRTM2-202ENST00000535041 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 PIK3R2O00459 728 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 SHOX2O60902 331 aaPredicted RBP13.18□□□□□ -0.3
LRTM2-202ENST00000535041 EGFL6Q8IUX8 553 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 SEPT1Q8WYJ6 367 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 PORCNQ9H237 461 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 PNMA2Q9UL42 364 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 DAAM1Q9Y4D1 1078 aa13.18□□□□□ -0.3
LRTM2-202ENST00000535041 EXTL3O43909 919 aa13.17□□□□□ -0.3
LRTM2-202ENST00000535041 CST3P01034 146 aaPredicted RBP13.17□□□□□ -0.3
LRTM2-202ENST00000535041 CDC25CP30307 473 aa13.17□□□□□ -0.3
LRTM2-202ENST00000535041 FNTAP49354 379 aa13.17□□□□□ -0.3
LRTM2-202ENST00000535041 OAZ1P54368 228 aa13.17□□□□□ -0.3
LRTM2-202ENST00000535041 TMEM62Q0P6H9 643 aa13.17□□□□□ -0.3
LRTM2-202ENST00000535041 PPP1R7Q15435 360 aa13.17□□□□□ -0.3
LRTM2-202ENST00000535041 XRRA1Q6P2D8 792 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms