RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.63■■□□□ 1.693e-6■■■■■ 62.5
PTPMT1-205ENST00000534775 GINS2Q9Y248 185 aa25.63■■□□□ 1.69
PTPMT1-205ENST00000534775 SCN10AQ9Y5Y9 1956 aa25.63■■□□□ 1.69
PTPMT1-205ENST00000534775 FANCGO15287 622 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 ADAMTS4O75173 837 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 URI1O94763 535 aaPredicted RBP25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 TNNC2P02585 160 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 TMEM191BP0C7N4 346 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 STAG3L1P0CL83 205 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 CCND3P30281 292 aaPredicted RBP25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 USP8P40818 1118 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 OSTNP61366 133 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 NCOA4Q13772 614 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 ALKBH5Q6P6C2 394 aaKnown RBP25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 CATSPER4Q7RTX7 472 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 RAET1EQ8TD07 263 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 TATDN2Q93075 761 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 ANKRD36BP1Q96IX9 119 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 PI4K2AQ9BTU6 479 aa25.62■■□□□ 1.69
PTPMT1-205ENST00000534775 TNFAIP3P21580 790 aa25.61■■□□□ 1.69
PTPMT1-205ENST00000534775 AXLP30530 894 aa25.61■■□□□ 1.69
PTPMT1-205ENST00000534775 CXCL17Q6UXB2 119 aa25.61■■□□□ 1.69
PTPMT1-205ENST00000534775 RNF10Q8N5U6 811 aaKnown RBP25.61■■□□□ 1.69
PTPMT1-205ENST00000534775 CEP120Q8N960 986 aa25.61■■□□□ 1.69
PTPMT1-205ENST00000534775 PXYLP1Q8TE99 480 aa25.61■■□□□ 1.69
PTPMT1-205ENST00000534775 OSMRQ99650 979 aa25.61■■□□□ 1.69
PTPMT1-205ENST00000534775 NAPGQ99747 312 aaPredicted RBP25.61■■□□□ 1.69
PTPMT1-205ENST00000534775 SYT11Q9BT88 431 aa25.61■■□□□ 1.69
PTPMT1-205ENST00000534775 TRIP12Q14669 1992 aaPredicted RBP25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 MACROD2A1Z1Q3 448 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 DDX3XO00571 662 aaKnown RBP eCLIP25.6■■□□□ 1.698e-8■■■■■ 40
PTPMT1-205ENST00000534775 CXCL8P10145 99 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 EIF4BP23588 611 aaKnown RBP25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 TBXAS1P24557 533 aaPredicted RBP25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 CST5P28325 142 aaPredicted RBP25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 ZNF200P98182 395 aaPredicted RBP25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 TRAPPC11Q7Z392 1133 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 SLC30A5Q8TAD4 765 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 FAM84AQ96KN4 292 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 AGPAT1Q99943 283 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 MTMR12Q9C0I1 747 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 ASB7Q9H672 318 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 GTF2IRD1Q9UHL9 959 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 INTUQ9ULD6 942 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 NENFQ9UMX5 172 aa25.6■■□□□ 1.69
PTPMT1-205ENST00000534775 TACC1O75410 805 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 CRYBB1P53674 252 aaPredicted RBP25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 TFAMQ00059 246 aaKnown RBP25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 TUBB2AQ13885 445 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 NBPF20Q3BBV1 942 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 MAP3K21Q5TCX8 1036 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 PCSK9Q8NBP7 692 aaKnown RBP25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 TRIM58Q8NG06 486 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 TUBB2BQ9BVA1 445 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 DUSP10Q9Y6W6 482 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 UQCRHLA0A096LP55 91 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 BTNL10A8MVZ5 291 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 RPLP2P05387 115 aaKnown RBP25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 UQCRHP07919 91 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 GTF2F1P35269 517 aaKnown RBP eCLIP25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 NOP14P78316 857 aaKnown RBP25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 TRPC3Q13507 836 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 NOTUMQ6P988 496 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 SLC27A1Q6PCB7 646 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 GLYCTKQ8IVS8 523 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 KLHDC9Q8NEP7 349 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 LNX1Q8TBB1 728 aaPredicted RBP25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 U2AF1L4Q8WU68 220 aaKnown RBP25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 ALS2CR12Q96Q35 445 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 CDHR5Q9HBB8 845 aa25.59■■□□□ 1.69
PTPMT1-205ENST00000534775 FKTNO75072 461 aa25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 FGFR4P22455 802 aa25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 GRM5P41594 1212 aa25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 SNX17Q15036 470 aa25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 SMYD5Q6GMV2 418 aa25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 RSPH3Q86UC2 560 aa25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 TMEM192Q8IY95 271 aa25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 DHX38Q92620 1227 aaKnown RBP25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 ACAP3Q96P50 834 aa25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 CCDC94Q9BW85 323 aaPredicted RBP25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 SAGE1Q9NXZ1 904 aa25.58■■□□□ 1.69
PTPMT1-205ENST00000534775 CLSTN1O94985 981 aa25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 ASGR1P07306 291 aa25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 H2AFZP0C0S5 128 aa25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 PRMT2P55345 433 aa25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 CUL2Q13617 745 aa25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 SGSM1Q2NKQ1 1148 aa25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 H2AFVQ71UI9 128 aa25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 CD302Q8IX05 232 aa25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 EFCAB13Q8IY85 973 aa25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 NOX5Q96PH1 765 aa25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 DDX20Q9UHI6 824 aaKnown RBP25.57■■□□□ 1.68
PTPMT1-205ENST00000534775 MROH7Q68CQ1 1323 aa25.56■■□□□ 1.68
PTPMT1-205ENST00000534775 LACTBL1A8MY62 500 aa25.56■■□□□ 1.68
PTPMT1-205ENST00000534775 M0QZ92 97 aa25.56■■□□□ 1.68
PTPMT1-205ENST00000534775 CYP26A1O43174 497 aa25.56■■□□□ 1.68
PTPMT1-205ENST00000534775 ASS1P00966 412 aaKnown RBP25.56■■□□□ 1.68
PTPMT1-205ENST00000534775 KRT5P13647 590 aa25.56■■□□□ 1.68
PTPMT1-205ENST00000534775 PDE6CP51160 858 aa25.56■■□□□ 1.68
PTPMT1-205ENST00000534775 BPIFB4P59827 614 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms