RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 ANKRD49Q8WVL7 239 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 RUBCNLQ9H714 662 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 PAPOLBQ9NRJ5 636 aaKnown RBP9.32□□□□□ -0.92
CTNND1-237ENST00000534579 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-237ENST00000534579 ARHGAP26Q9UNA1 814 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 SLC25A27O95847 323 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 CXCR5P32302 372 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 PPP4CP60510 307 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 ALKBH5Q6P6C2 394 aaKnown RBP9.32□□□□□ -0.92
CTNND1-237ENST00000534579 ZNF507Q8TCN5 953 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 ATG4CQ96DT6 458 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 SIK2Q9H0K1 926 aa9.32□□□□□ -0.92
CTNND1-237ENST00000534579 PFASO15067 1338 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 PDS5AQ29RF7 1337 aaKnown RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 PRR23AA6NEV1 266 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 UBE2Q2LH0YL09 131 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 LMNAP02545 664 aaKnown RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 CARSP49589 748 aaKnown RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 COPS2P61201 443 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 AP1ARQ63HQ0 302 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 SHC4Q6S5L8 630 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 PASD1Q8IV76 773 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 GLYCTKQ8IVS8 523 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 HES6Q96HZ4 224 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 AGBL1Q96MI9 1066 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 SH2D3AQ9BRG2 576 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 MUC3BQ9H195 1237 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 SENP2Q9HC62 589 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 ADARB2Q9NS39 739 aaKnown RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 ANGPTL2Q9UKU9 493 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 JRKLQ9Y4A0 524 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 STXBP3O00186 592 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 GH1P01241 217 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 ATXN3P54252 364 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 OCA2Q04671 838 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 SNCBQ16143 134 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 CENPUQ71F23 418 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 KCTD17Q8N5Z5 321 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 TRIML2Q8N7C3 387 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 C1orf131Q8NDD1 294 aaKnown RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 JMJD4Q9H9V9 463 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 SCUBE2Q9NQ36 999 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 SPATS2LQ9NUQ6 558 aaKnown RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 CDC23Q9UJX2 597 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 HEY1Q9Y5J3 304 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 USP27XA6NNY8 438 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 KPNA7A9QM74 516 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 PRR23D1E9PI22 279 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 PGRMC1O00264 195 aaKnown RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 PJA2O43164 708 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 KDM1AO60341 852 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 MAN1A2O60476 641 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 PRR23D2P0DMB1 279 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 HPCAP84074 193 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 SREBF2Q12772 1141 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 CRLF3Q8IUI8 442 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 CCDC197Q8NCU1 140 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 PANX2Q96RD6 677 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 TSEN34Q9BSV6 310 aaKnown RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 VPS11Q9H270 941 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 RBAKQ9NYW8 714 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 COPG1Q9Y678 874 aaKnown RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 BCL9O00512 1426 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 NPHP3-ACAD11A0A0J9YXS1 232 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 LGALS16A8MUM7 142 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 DCTN3O75935 186 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 HMBSP08397 361 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 PDIA5Q14554 519 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 NAALADL2Q58DX5 795 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 ARHGAP18Q8N392 663 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 HIPK4Q8NE63 616 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 NDEL1Q9GZM8 345 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 ECT2Q9H8V3 914 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 CEP72Q9P209 647 aa9.31□□□□□ -0.92
CTNND1-237ENST00000534579 AGO2Q9UKV8 859 aaKnown RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 MORC2Q9Y6X9 1032 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-237ENST00000534579 CCDC195A0A1B0GUA6 201 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 MFAP3LO75121 409 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 DARSP14868 501 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 EPHX2P34913 555 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 GUCA1AP43080 201 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 C11orf74Q86VG3 221 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 GPD1LQ8N335 351 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 ZDHHC15Q96MV8 337 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 TUBB6Q9BUF5 446 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 ADAM22Q9P0K1 906 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 H2AFY2Q9P0M6 372 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 PIN4Q9Y237 131 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 ATP8A1Q9Y2Q0 1164 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 ATP1A1P05023 1023 aaKnown RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 HIST1H2AGP0C0S8 130 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-237ENST00000534579 KITP10721 976 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 HIST1H2ADP20671 130 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 SLC8A1P32418 973 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 SLCO1A2P46721 670 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 NFIAQ12857 509 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 DMC1Q14565 340 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 EFTUD2Q15029 972 aaKnown RBP eCLIP9.3□□□□□ -0.923e-8■■■■■ 29.5
CTNND1-237ENST00000534579 XKR3Q5GH77 459 aa9.3□□□□□ -0.92
CTNND1-237ENST00000534579 EFHC2Q5JST6 749 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms