RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 LMAN2LQ9H0V9 348 aa26.28■■□□□ 1.8
SIPA1-210ENST00000534406 TRAF3IP3Q9Y228 551 aa26.28■■□□□ 1.8
SIPA1-210ENST00000534406 GRM6O15303 877 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 PPP1R2P41236 205 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 KRT17Q04695 432 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 UBE3AQ05086 875 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 PTPROQ16827 1216 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 ISM2Q6H9L7 571 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 TMEM173Q86WV6 379 aaPredicted RBP26.27■■□□□ 1.8
SIPA1-210ENST00000534406 IGSF21Q96ID5 467 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 FBXL18Q96ME1 805 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 UROC1Q96N76 676 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 ASB7Q9H672 318 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 ALG13Q9NP73 1137 aaKnown RBP26.27■■□□□ 1.8
SIPA1-210ENST00000534406 CACNG4Q9UBN1 327 aa26.27■■□□□ 1.8
SIPA1-210ENST00000534406 ZNF233A6NK53 670 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 XPOTO43592 962 aaKnown RBP26.26■■□□□ 1.79
SIPA1-210ENST00000534406 NR3C1P04150 777 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 FOSL2P15408 326 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 SOX4Q06945 474 aaPredicted RBP26.26■■□□□ 1.79
SIPA1-210ENST00000534406 SPAG1Q07617 926 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 ADGRE1Q14246 886 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 TMEM132DQ14C87 1099 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 SNRNP35Q16560 246 aaKnown RBP26.26■■□□□ 1.79
SIPA1-210ENST00000534406 JADE1Q6IE81 842 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 CBWD2Q8IUF1 395 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 SLC9A9Q8IVB4 645 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 ADSSL1Q8N142 457 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 SPPL3Q8TCT6 385 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 BCL7CQ8WUZ0 217 aaPredicted RBP26.26■■□□□ 1.79
SIPA1-210ENST00000534406 C18orf25Q96B23 403 aaPredicted RBP26.26■■□□□ 1.79
SIPA1-210ENST00000534406 COLEC11Q9BWP8 271 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 MARCH5Q9NX47 278 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 UBQLN1Q9UMX0 589 aaKnown RBP26.26■■□□□ 1.79
SIPA1-210ENST00000534406 LZTS1Q9Y250 596 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 DERAQ9Y315 318 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 ATG2AQ2TAZ0 1938 aa26.26■■□□□ 1.79
SIPA1-210ENST00000534406 PSMA7O14818 248 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 EXOC3O60645 756 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 NFICP08651 508 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 IGFBP4P22692 258 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 MYBPC2Q14324 1141 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 NFIL3Q16649 462 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 TMEM174Q8WUU8 243 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 PAAF1Q9BRP4 392 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 GOLGA2P5Q9HBQ8 144 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 DMAC2Q9NW81 257 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 TUBGCP4Q9UGJ1 667 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 PUF60Q9UHX1 559 aaKnown RBP26.25■■□□□ 1.79
SIPA1-210ENST00000534406 C2CD2Q9Y426 696 aa26.25■■□□□ 1.79
SIPA1-210ENST00000534406 PRRC2BQ5JSZ5 2229 aaKnown RBP26.24■■□□□ 1.79
SIPA1-210ENST00000534406 BMP6P22004 513 aa26.24■■□□□ 1.79
SIPA1-210ENST00000534406 ZCWPW2Q504Y3 356 aa26.24■■□□□ 1.79
SIPA1-210ENST00000534406 POF1BQ8WVV4 589 aa26.24■■□□□ 1.79
SIPA1-210ENST00000534406 RABGGTAQ92696 567 aa26.24■■□□□ 1.79
SIPA1-210ENST00000534406 MRPL38Q96DV4 380 aaKnown RBP26.24■■□□□ 1.79
SIPA1-210ENST00000534406 TSG101Q99816 390 aa26.24■■□□□ 1.79
SIPA1-210ENST00000534406 LMCD1Q9NZU5 365 aa26.24■■□□□ 1.79
SIPA1-210ENST00000534406 EDRF1Q3B7T1 1238 aa26.23■■□□□ 1.79
SIPA1-210ENST00000534406 NT5DC4Q86YG4 428 aa26.23■■□□□ 1.79
SIPA1-210ENST00000534406 BEST2Q8NFU1 509 aa26.23■■□□□ 1.79
SIPA1-210ENST00000534406 DDX27Q96GQ7 796 aaKnown RBP26.23■■□□□ 1.79
SIPA1-210ENST00000534406 TLR9Q9NR96 1032 aa26.23■■□□□ 1.79
SIPA1-210ENST00000534406 STK39Q9UEW8 545 aa26.23■■□□□ 1.79
SIPA1-210ENST00000534406 MYO7AQ13402 2215 aa26.23■■□□□ 1.79
SIPA1-210ENST00000534406 F8W810 466 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 TULP1O00294 542 aaPredicted RBP26.22■■□□□ 1.79
SIPA1-210ENST00000534406 CSPG5O95196 566 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 KIF4AO95239 1232 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 POU3F3P20264 500 aaPredicted RBP26.22■■□□□ 1.79
SIPA1-210ENST00000534406 CYP3A5P20815 502 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 PTMSP20962 102 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 NR2F2P24468 414 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 RPL13P26373 211 aaKnown RBP26.22■■□□□ 1.79
SIPA1-210ENST00000534406 RPL9P32969 192 aaKnown RBP26.22■■□□□ 1.79
SIPA1-210ENST00000534406 CLCNKBP51801 687 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 CYP24A1Q07973 514 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 SURF1Q15526 300 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 ZBTB6Q15916 424 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 CENPPQ6IPU0 288 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 DDX53Q86TM3 631 aaKnown RBP26.22■■□□□ 1.79
SIPA1-210ENST00000534406 EFCAB13Q8IY85 973 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 RDH13Q8NBN7 331 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 DHTKD1Q96HY7 919 aaPredicted RBP26.22■■□□□ 1.79
SIPA1-210ENST00000534406 PDE11AQ9HCR9 933 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 ADAM28Q9UKQ2 775 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 MTCH2Q9Y6C9 303 aa26.22■■□□□ 1.79
SIPA1-210ENST00000534406 TMEM189-UBE2V1I3L0A0 370 aa26.21■■□□□ 1.79
SIPA1-210ENST00000534406 PODXLO00592 558 aa26.21■■□□□ 1.79
SIPA1-210ENST00000534406 CD44P16070 742 aaKnown RBP26.21■■□□□ 1.79
SIPA1-210ENST00000534406 DNAJB1P25685 340 aa26.21■■□□□ 1.79
SIPA1-210ENST00000534406 WNT7BP56706 349 aa26.21■■□□□ 1.79
SIPA1-210ENST00000534406 LRRC63Q05C16 580 aa26.21■■□□□ 1.79
SIPA1-210ENST00000534406 UPP1Q16831 310 aa26.21■■□□□ 1.79
SIPA1-210ENST00000534406 TIGD5Q53EQ6 642 aa26.21■■□□□ 1.79
SIPA1-210ENST00000534406 SPATA1Q5VX52 437 aa26.21■■□□□ 1.79
SIPA1-210ENST00000534406 CEP135Q66GS9 1140 aa26.21■■□□□ 1.79
SIPA1-210ENST00000534406 HASPINQ8TF76 798 aa26.21■■□□□ 1.79
SIPA1-210ENST00000534406 SF3B1O75533 1304 aaKnown RBP eCLIP26.2■■□□□ 1.79
SIPA1-210ENST00000534406 CCNE1P24864 410 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms