RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 Q6ZRM9 215 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 PLXDC1Q8IUK5 500 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 RGMAQ96B86 450 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 C1GALT1C1Q96EU7 318 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 ACO2Q99798 780 aaKnown RBP8.24□□□□□ -1.09
CASP4-213ENST00000534356 KLC2Q9H0B6 622 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 SPON1Q9HCB6 807 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 CALCOCO1Q9P1Z2 691 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 PRR5-ARHGAP8B1AHC4 643 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 TEX33O43247 280 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 FTLP02792 175 aaPredicted RBP8.23□□□□□ -1.09
CASP4-213ENST00000534356 MAGEA10P43363 369 aaPredicted RBP8.23□□□□□ -1.09
CASP4-213ENST00000534356 SCNN1GP51170 649 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 MAP2K6P52564 334 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 RAP2BP61225 183 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 LCE4AQ5TA78 99 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 GADL1Q6ZQY3 521 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 SEM1Q6ZVN7 128 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 RNF169Q8NCN4 708 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 TFAP2CQ92754 450 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 RUNDC1Q96C34 613 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 PGBD4Q96DM1 585 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 KRTAP3-1Q9BYR8 98 aa8.23□□□□□ -1.09
CASP4-213ENST00000534356 RSF1Q96T23 1441 aaPredicted RBP8.22□□□□□ -1.09
CASP4-213ENST00000534356 MYBP10242 640 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 ATF3P18847 181 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 EFEMP1Q12805 493 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 SNAPC2Q13487 334 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 R3HDM1Q15032 1099 aaKnown RBP8.22□□□□□ -1.09
CASP4-213ENST00000534356 VPS72Q15906 364 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 METTL24Q5JXM2 366 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 EFCAB12Q6NXP0 572 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 ZNF529Q6P280 563 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 C3orf20Q8ND61 904 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 PPP1R35Q8TAP8 253 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 GPR87Q9BY21 358 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 C11orf54Q9H0W9 315 aaPredicted RBP8.22□□□□□ -1.09
CASP4-213ENST00000534356 PCDHA3Q9Y5H8 950 aa8.22□□□□□ -1.09
CASP4-213ENST00000534356 AQRO60306 1485 aaKnown RBP eCLIP8.21□□□□□ -1.09
CASP4-213ENST00000534356 ARAP1Q96P48 1450 aa8.21□□□□□ -1.09
CASP4-213ENST00000534356 TCRBV7S2A1N4TA0A589 114 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 KLRG2A4D1S0 409 aaPredicted RBP8.21□□□□□ -1.1
CASP4-213ENST00000534356 GOLGA6CA6NDK9 693 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 GOLGA6BA6NDN3 693 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 SLC16A6O15403 523 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 CYP27B1O15528 508 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 CTNND1O60716 968 aaKnown RBP8.21□□□□□ -1.1
CASP4-213ENST00000534356 GOLGA6DP0CG33 693 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 MALP21145 153 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 HK3P52790 923 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 NOGQ13253 232 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 DCAF17Q5H9S7 520 aaPredicted RBP8.21□□□□□ -1.1
CASP4-213ENST00000534356 THEMIS2Q5TEJ8 643 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 UBE3BQ7Z3V4 1068 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 PALM2Q8IXS6 379 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 CAMKK1Q8N5S9 505 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 ZBTB34Q8NCN2 500 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 ZFP28Q8NHY6 868 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 MNTQ99583 582 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 CGRRF1Q99675 332 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 KMT5AQ9NQR1 393 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 GOLGA6AQ9NYA3 693 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 POLHQ9Y253 713 aa8.21□□□□□ -1.1
CASP4-213ENST00000534356 VSTM5A8MXK1 200 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 SBK3P0C264 359 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 CREMQ03060 361 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 RRP1BQ14684 758 aaKnown RBP8.2□□□□□ -1.1
CASP4-213ENST00000534356 PRKD1Q15139 912 aaPredicted RBP8.2□□□□□ -1.1
CASP4-213ENST00000534356 GFOD2Q3B7J2 385 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 DACT2Q5SW24 774 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 ATXN7L2Q5T6C5 722 aaPredicted RBP8.2□□□□□ -1.1
CASP4-213ENST00000534356 DRICH1Q6PGQ1 229 aaPredicted RBP8.2□□□□□ -1.1
CASP4-213ENST00000534356 HTR3DQ70Z44 454 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 SYT12Q8IV01 421 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 OR10H5Q8NGA6 315 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 DVL3Q92997 716 aaPredicted RBP8.2□□□□□ -1.1
CASP4-213ENST00000534356 NDC1Q9BTX1 674 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 FBXO34Q9NWN3 711 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 POGKQ9P215 609 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 CLCA2Q9UQC9 943 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 NR2E3Q9Y5X4 410 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 CHD1O14646 1710 aa8.2□□□□□ -1.1
CASP4-213ENST00000534356 KRTAP23-1A1A580 65 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 H3BML4 177 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 KIAA0391O15091 583 aaKnown RBP8.19□□□□□ -1.1
CASP4-213ENST00000534356 MUSKO15146 869 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 GRM6O15303 877 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 ZNF20P17024 532 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 MAN2A2P49641 1150 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 PTTG1IPP53801 180 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 ADAM17P78536 824 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 UBXN2BQ14CS0 331 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 CDSNQ15517 529 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 ARHGAP29Q52LW3 1261 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 NAIF1Q69YI7 327 aaPredicted RBP8.19□□□□□ -1.1
CASP4-213ENST00000534356 HEATR3Q7Z4Q2 680 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 DENND1CQ8IV53 801 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 MAN1C1Q9NR34 630 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 GABBR1Q9UBS5 961 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 DDX20Q9UHI6 824 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms