RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 TIFAQ96CG3 184 aa15.27■□□□□ 0.04
CMTM1-218ENST00000533915 ANKRD36BP1Q96IX9 119 aa15.27■□□□□ 0.04
CMTM1-218ENST00000533915 MFSD14AQ96MC6 490 aa15.27■□□□□ 0.04
CMTM1-218ENST00000533915 ZNF558Q96NG5 402 aa15.27■□□□□ 0.04
CMTM1-218ENST00000533915 PPP1R10Q96QC0 940 aaKnown RBP15.27■□□□□ 0.04
CMTM1-218ENST00000533915 TGS1Q96RS0 853 aaKnown RBP15.27■□□□□ 0.04
CMTM1-218ENST00000533915 MAGEC2Q9UBF1 373 aaPredicted RBP15.27■□□□□ 0.04
CMTM1-218ENST00000533915 STK39Q9UEW8 545 aa15.27■□□□□ 0.04
CMTM1-218ENST00000533915 MYO9BQ13459 2157 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 TMEM265A0A087WTH1 108 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 PTGESO14684 152 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 ZC3H11AO75152 810 aaKnown RBP eCLIP15.26■□□□□ 0.03
CMTM1-218ENST00000533915 AKAP3O75969 853 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 TNNC2P02585 160 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 TMEM191BP0C7N4 346 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 TNNI1P19237 187 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 DNAJB2P25686 324 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 RPL9P32969 192 aaKnown RBP15.26■□□□□ 0.03
CMTM1-218ENST00000533915 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 CCDC40Q4G0X9 1142 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 GLRA4Q5JXX5 417 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 SPATA1Q5VX52 437 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 FRMD5Q7Z6J6 570 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 WDR49Q8IV35 697 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 ZC3H3Q8IXZ2 948 aaKnown RBP15.26■□□□□ 0.03
CMTM1-218ENST00000533915 GSTCDQ8NEC7 633 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 ENOX1Q8TC92 643 aaKnown RBP15.26■□□□□ 0.03
CMTM1-218ENST00000533915 TMC2Q8TDI7 906 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 CLP1Q92989 425 aaKnown RBP15.26■□□□□ 0.03
CMTM1-218ENST00000533915 CCDC127Q96BQ5 260 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 COLEC11Q9BWP8 271 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 PLVAPQ9BX97 442 aa15.26■□□□□ 0.03
CMTM1-218ENST00000533915 SRRTQ9BXP5 876 aaKnown RBP15.26■□□□□ 0.03
CMTM1-218ENST00000533915 ARMCX3Q9UH62 379 aaPredicted RBP15.26■□□□□ 0.03
CMTM1-218ENST00000533915 MRPL42Q9Y6G3 142 aaKnown RBP15.26■□□□□ 0.03
CMTM1-218ENST00000533915 GBF1Q92538 1859 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 LINC01553A4QN01 128 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 SMTNL1A8MU46 457 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 RBAK-RBAKDNI3L0D1 243 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 IKBKBO14920 756 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 RB1P06400 928 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 DLATP10515 647 aaKnown RBP15.25■□□□□ 0.03
CMTM1-218ENST00000533915 PAX3P23760 479 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 OR1G1P47890 313 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 CASP4P49662 377 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 VAMP7P51809 220 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 TFAMQ00059 246 aaKnown RBP15.25■□□□□ 0.03
CMTM1-218ENST00000533915 MYL5Q02045 173 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 ANO6Q4KMQ2 910 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 JADE1Q6IE81 842 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 LRRC55Q6ZSA7 311 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 DUSP9Q99956 384 aaKnown RBP15.25■□□□□ 0.03
CMTM1-218ENST00000533915 BPIFA3Q9BQP9 254 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 DNAJC25Q9H1X3 360 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 NKX2-4Q9H2Z4 354 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 THAP9Q9H5L6 903 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 PDE11AQ9HCR9 933 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 FAN1Q9Y2M0 1017 aa15.25■□□□□ 0.03
CMTM1-218ENST00000533915 LCHNA4D1U4 455 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 BECN2A8MW95 431 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 MYOGP15173 224 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 CTNNB1P35222 781 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 PBX2P40425 430 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 AFF1P51825 1210 aaKnown RBP15.24■□□□□ 0.03
CMTM1-218ENST00000533915 BCAR1P56945 870 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 TPM4P67936 248 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 KRT17Q04695 432 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 DSC1Q08554 894 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 BFSP1Q12934 665 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 KCNT2Q6UVM3 1135 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 ZNF280BQ86YH2 543 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 COLGALT2Q8IYK4 626 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 ZSWIM2Q8NEG5 633 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 ANKRD20A12PQ8NF67 263 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 PARD3BQ8TEW8 1205 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 ZMAT2Q96NC0 199 aaKnown RBP15.24■□□□□ 0.03
CMTM1-218ENST00000533915 CGRRF1Q99675 332 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 C11orf84Q9BUA3 381 aaPredicted RBP15.24■□□□□ 0.03
CMTM1-218ENST00000533915 GZF1Q9H116 711 aaPredicted RBP15.24■□□□□ 0.03
CMTM1-218ENST00000533915 CWH43Q9H720 699 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 NRDE2Q9H7Z3 1164 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 MIOSQ9NXC5 875 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 SPG21Q9NZD8 308 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 PUF60Q9UHX1 559 aaKnown RBP15.24■□□□□ 0.03
CMTM1-218ENST00000533915 ITGA11Q9UKX5 1188 aa15.24■□□□□ 0.03
CMTM1-218ENST00000533915 YBX2Q9Y2T7 364 aaKnown RBP15.24■□□□□ 0.03
CMTM1-218ENST00000533915 PDCD11Q14690 1871 aaKnown RBP15.24■□□□□ 0.03
CMTM1-218ENST00000533915 ANK1P16157 1881 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 TRAPPC3O43617 180 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 PHACTR2O75167 634 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 DDHD2O94830 711 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 GALTP07902 379 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 TPM2P07951 284 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 NFICP08651 508 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 PRKCSHP14314 528 aaPredicted RBP15.23■□□□□ 0.03
CMTM1-218ENST00000533915 GTF2H1P32780 548 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 BMPR1AP36894 532 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 ZNF165P49910 485 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 ERVK-21P61565 698 aa15.23■□□□□ 0.03
CMTM1-218ENST00000533915 TAP1Q03518 808 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms