RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CNOT7Q9UIV1 285 aaKnown RBP20.63■□□□□ 0.89
CAPN1-226ENST00000533820 SERPINA10Q9UK55 444 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 STK38LQ9Y2H1 464 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 LTBP1Q14766 1721 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 PECAM1P16284 738 aaPredicted RBP20.63■□□□□ 0.89
CAPN1-226ENST00000533820 RFX1P22670 979 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 MPP2Q14168 576 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 PASD1Q8IV76 773 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 KLHL11Q9NVR0 708 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 KCND2Q9NZV8 630 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 USTQ9Y2C2 406 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 LY75O60449 1722 aa20.63■□□□□ 0.89
CAPN1-226ENST00000533820 UBR3Q6ZT12 1888 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 ASAP2O43150 1006 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 THAP12O43422 761 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 MYBL1P10243 752 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 HADHBP55084 474 aaKnown RBP20.62■□□□□ 0.89
CAPN1-226ENST00000533820 SPDYCQ5MJ68 293 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 ZFYVE27Q5T4F4 411 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 TLDC1Q6P9B6 456 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 CYP4X1Q8N118 509 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 TRIM33Q9UPN9 1127 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 TP73O15350 636 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 ATP6V1G2O95670 118 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 QARSP47897 775 aaKnown RBP20.62■□□□□ 0.89
CAPN1-226ENST00000533820 CLUL1Q15846 466 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 CYP4F22Q6NT55 531 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 SRRM1Q8IYB3 904 aaKnown RBP20.62■□□□□ 0.89
CAPN1-226ENST00000533820 TMEM39BQ9GZU3 492 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 PNMA3Q9UL41 463 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 RAD17O75943 681 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 GJB6O95452 261 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 SHC3Q92529 594 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 HOMER3Q9NSC5 361 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 GTF3C4Q9UKN8 822 aa20.62■□□□□ 0.89
CAPN1-226ENST00000533820 SNX3O60493 162 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 DNAJC8O75937 253 aaPredicted RBP20.61■□□□□ 0.89
CAPN1-226ENST00000533820 GZMAP12544 262 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 RRM1P23921 792 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 CNGA1P29973 690 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 PRCCQ92733 491 aaPredicted RBP20.61■□□□□ 0.89
CAPN1-226ENST00000533820 NT5C1BQ96P26 610 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 NSRP1Q9H0G5 558 aaKnown RBP20.61■□□□□ 0.89
CAPN1-226ENST00000533820 RANBP17Q9H2T7 1088 aaKnown RBP20.61■□□□□ 0.89
CAPN1-226ENST00000533820 TMOD2Q9NZR1 351 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 GSTTP1A0A1W2PQM5 241 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 ATP9AO75110 1047 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 CYP1A2P05177 515 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 BRAFP15056 766 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 CDR2Q01850 454 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 USP4Q13107 963 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 B3GNT9Q6UX72 402 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 FAM47EQ6ZV65 393 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 HELQQ8TDG4 1101 aa20.61■□□□□ 0.89
CAPN1-226ENST00000533820 STMN4Q9H169 189 aaPredicted RBP20.61■□□□□ 0.89
CAPN1-226ENST00000533820 DENND3A2RUS2 1198 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 DHX15O43143 795 aaKnown RBP20.6■□□□□ 0.89
CAPN1-226ENST00000533820 RAB27AP51159 221 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 KRT39Q6A163 491 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 VSTM1Q6UX27 236 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 NLGN1Q8N2Q7 840 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 PSPC1Q8WXF1 523 aaKnown RBP20.6■□□□□ 0.89
CAPN1-226ENST00000533820 POMGNT1Q8WZA1 660 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 STAMBPL1Q96FJ0 436 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 RIT2Q99578 217 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 EIF4E1BA6NMX2 242 aaKnown RBP20.6■□□□□ 0.89
CAPN1-226ENST00000533820 A8MUI8 341 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 CETPP11597 493 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 MTMR1Q13613 665 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 KLHL23Q8NBE8 558 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 RUNDC3BQ96NL0 473 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 ANAPC5Q9UJX4 755 aa20.6■□□□□ 0.89
CAPN1-226ENST00000533820 GGPS1O95749 300 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 GHRP10912 638 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 TKFCQ3LXA3 575 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 RSRC1Q96IZ7 334 aaKnown RBP20.59■□□□□ 0.89
CAPN1-226ENST00000533820 ZCWPW1Q9H0M4 648 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 ECT2Q9H8V3 914 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 RAVER2Q9HCJ3 691 aaKnown RBP20.59■□□□□ 0.89
CAPN1-226ENST00000533820 TESPA1A2RU30 521 aaPredicted RBP20.59■□□□□ 0.89
CAPN1-226ENST00000533820 MGRN1O60291 552 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 ENTPD3O75355 529 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 UPP2O95045 317 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 MRPS9P82933 396 aaKnown RBP20.59■□□□□ 0.89
CAPN1-226ENST00000533820 CYP1B1Q16678 543 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 SV2AQ7L0J3 742 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 KCTD17Q8N5Z5 321 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 RAB20Q9NX57 234 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 SLC12A4Q9UP95 1085 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 USP15Q9Y4E8 981 aaPredicted RBP20.59■□□□□ 0.89
CAPN1-226ENST00000533820 AFF2P51816 1311 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 CFHP08603 1231 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 RALAP11233 206 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 ATF2P15336 505 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 ITIH4Q14624 930 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 SPOPLQ6IQ16 392 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 CYFIP1Q7L576 1253 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 FBXL13Q8NEE6 735 aa20.59■□□□□ 0.89
CAPN1-226ENST00000533820 YDJCA8MPS7 323 aa20.58■□□□□ 0.89
CAPN1-226ENST00000533820 CD58P19256 250 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms