RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 QARSP47897 775 aaKnown RBP13.67□□□□□ -0.22
SVIP-205ENST00000533774 TUSC3Q13454 348 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 NTRK3Q16288 839 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 UVSSAQ2YD98 709 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 PRSS36Q5K4E3 855 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 VITQ6UXI7 678 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 ASAP3Q8TDY4 903 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 DDX1Q92499 740 aaKnown RBP13.67□□□□□ -0.22
SVIP-205ENST00000533774 ZSWIM3Q96MP5 696 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 BRD9Q9H8M2 597 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 ZNF334Q9HCZ1 680 aaPredicted RBP13.67□□□□□ -0.22
SVIP-205ENST00000533774 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 VAV3Q9UKW4 847 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 NAP1L2Q9ULW6 460 aaPredicted RBP13.67□□□□□ -0.22
SVIP-205ENST00000533774 DMXL2Q8TDJ6 3036 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 INO80B-WBP1J3KQ70 363 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 ASAP2O43150 1006 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 SLC37A4O43826 429 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 RFC5P40937 340 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 RCAN1P53805 252 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 AASDHQ4L235 1098 aaPredicted RBP13.66□□□□□ -0.22
SVIP-205ENST00000533774 CD300LGQ6UXG3 332 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 Q6ZS52 159 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 BICD2Q8TD16 824 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 IER2Q9BTL4 223 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 TRMT61BQ9BVS5 477 aaKnown RBP13.66□□□□□ -0.22
SVIP-205ENST00000533774 ARRDC1-AS1Q9H2J1 176 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 SMOC1Q9H4F8 434 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 AVENQ9NQS1 362 aaPredicted RBP13.66□□□□□ -0.22
SVIP-205ENST00000533774 PIAS3Q9Y6X2 628 aa13.66□□□□□ -0.22
SVIP-205ENST00000533774 TTLL13PA6NNM8 815 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 M0R2N6 131 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 AXIN1O15169 862 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 KCNK5O95279 499 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 FGFR3P22607 806 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 CCNE1P24864 410 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 GDI1P31150 447 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 TIE1P35590 1138 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 PTGDRQ13258 359 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 PPP2R5CQ13362 524 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 CAPSQ13938 189 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 PPP2R5DQ14738 602 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 STPG1Q5TH74 334 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 UNQ6494/PRO21346Q6UXR6 183 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 LONP2Q86WA8 852 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 SPEM1Q8N4L4 309 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 ASB16Q96NS5 453 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 TMEM121BQ9BXQ6 578 aaPredicted RBP13.65□□□□□ -0.22
SVIP-205ENST00000533774 TRIM6Q9C030 488 aaPredicted RBP13.65□□□□□ -0.22
SVIP-205ENST00000533774 RGL1Q9NZL6 768 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 MTRRQ9UBK8 725 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 WASF3Q9UPY6 502 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 CDY1Q9Y6F8 540 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 ZMYM2Q9UBW7 1377 aa13.65□□□□□ -0.22
SVIP-205ENST00000533774 ABCA7Q8IZY2 2146 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 NID2Q14112 1375 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 A0A1B0GUA9 196 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 WDR27A2RRH5 827 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 ARNTLO00327 626 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 GIPC1O14908 333 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 MOSPD3O75425 235 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 PAPSS2O95340 614 aaPredicted RBP13.64□□□□□ -0.23
SVIP-205ENST00000533774 TOP3BO95985 862 aaKnown RBP13.64□□□□□ -0.23
SVIP-205ENST00000533774 ZNF806P0C7X5 589 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 YWHABP31946 246 aaKnown RBP13.64□□□□□ -0.23
SVIP-205ENST00000533774 VIPR2P41587 438 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 SOX9P48436 509 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 NPY5RQ15761 445 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 SLC27A1Q6PCB7 646 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 KDF1Q8NAX2 398 aaPredicted RBP13.64□□□□□ -0.23
SVIP-205ENST00000533774 TCP11Q8WWU5 503 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 LXNQ9BS40 222 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 LSM14BQ9BX40 385 aaKnown RBP13.64□□□□□ -0.23
SVIP-205ENST00000533774 ZFP14Q9HCL3 533 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 ANO2Q9NQ90 1003 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 TRPV5Q9NQA5 729 aa13.64□□□□□ -0.23
SVIP-205ENST00000533774 ASCC3Q8N3C0 2202 aaKnown RBP13.64□□□□□ -0.23
SVIP-205ENST00000533774 NUP210Q8TEM1 1887 aaPredicted RBP13.63□□□□□ -0.23
SVIP-205ENST00000533774 PCNX2A6NKB5 2137 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 ARHGEF37A1IGU5 675 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 P4HBP07237 508 aaKnown RBP13.63□□□□□ -0.23
SVIP-205ENST00000533774 PTPN2P17706 415 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 SPINK2P20155 84 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 TKTP29401 623 aaKnown RBP13.63□□□□□ -0.23
SVIP-205ENST00000533774 CNR2P34972 360 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 POU5F1BQ06416 359 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 PCBP1Q15365 356 aaKnown RBP eCLIP13.63□□□□□ -0.23
SVIP-205ENST00000533774 XKR9Q5GH70 373 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
SVIP-205ENST00000533774 CEP68Q76N32 757 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 C4orf19Q8IY42 314 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 CCDC148Q8NFR7 591 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 IRF7Q92985 503 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 RSPRY1Q96DX4 576 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 DDX27Q96GQ7 796 aaKnown RBP13.63□□□□□ -0.23
SVIP-205ENST00000533774 DYDC2Q96IM9 177 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 MTRQ99707 1265 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 CORO1BQ9BR76 489 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 SLC26A6Q9BXS9 759 aa13.63□□□□□ -0.23
SVIP-205ENST00000533774 KCNMB3Q9NPA1 279 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms