RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 NFKBIBQ15653 356 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 KLHL10Q6JEL2 608 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 SPRED2Q7Z698 418 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 NOC3LQ8WTT2 800 aaKnown RBP17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 NELFBQ8WX92 580 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 FAM212AQ96EL1 285 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 KIF12Q96FN5 646 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 MFSD14AQ96MC6 490 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 UROC1Q96N76 676 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 DNAJB4Q9UDY4 337 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 DACH1Q9UI36 760 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 UBQLN1Q9UMX0 589 aaKnown RBP17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 FRMD4BQ9Y2L6 1034 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 FAN1Q9Y2M0 1017 aa17.86■□□□□ 0.45
PACSIN3-210ENST00000533686 CETN3O15182 167 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 LETM1O95202 739 aaPredicted RBP17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 CYP24A1Q07973 514 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 JADE1Q6IE81 842 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 TTI2Q6NXR4 508 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 SASS6Q6UVJ0 657 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 SLC39A11Q8N1S5 342 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 RDH13Q8NBN7 331 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 FBXO22Q8NEZ5 403 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 ARNTL2Q8WYA1 636 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 DDX27Q96GQ7 796 aaKnown RBP17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 C11orf84Q9BUA3 381 aaPredicted RBP17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 MKNK1Q9BUB5 465 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 SPG21Q9NZD8 308 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 RWDD2AQ9UIY3 292 aa17.85■□□□□ 0.45
PACSIN3-210ENST00000533686 TRIM49BA6NDI0 452 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 H3BNC9 293 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 NRP1O14786 923 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 RPL9P32969 192 aaKnown RBP17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 PSMC2P35998 433 aaKnown RBP17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 OR1G1P47890 313 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 CASP4P49662 377 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 MCCD1P59942 119 aaPredicted RBP17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 PLCB3Q01970 1234 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 ENPEPQ07075 957 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 SPAG1Q07617 926 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 TMEM132DQ14C87 1099 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 PSMD6Q15008 389 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 DPCR1Q3MIW9 517 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 SPATA1Q5VX52 437 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 CEP135Q66GS9 1140 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 KLHL23Q8NBE8 558 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 BEST2Q8NFU1 509 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 COLEC11Q9BWP8 271 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 CERS4Q9HA82 394 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 PDE11AQ9HCR9 933 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 MTUS1Q9ULD2 1270 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 CTNND2Q9UQB3 1225 aa17.84■□□□□ 0.45
PACSIN3-210ENST00000533686 AKAP3O75969 853 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 FGF18O76093 207 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 NFICP08651 508 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 ERCC5P28715 1186 aaPredicted RBP17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 LRPAP1P30533 357 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 WNT7BP56706 349 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 UBE3AQ05086 875 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 SOX4Q06945 474 aaPredicted RBP17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 EFCAB13Q8IY85 973 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 CACTINQ8WUQ7 758 aaKnown RBP17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 C18orf25Q96B23 403 aaPredicted RBP17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 IGSF21Q96ID5 467 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 CEP63Q96MT8 703 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 DUSP9Q99956 384 aaKnown RBP17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 ANO10Q9NW15 660 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 STK39Q9UEW8 545 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 LZTS1Q9Y250 596 aa17.83■□□□□ 0.44
PACSIN3-210ENST00000533686 CITO14578 2027 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 EPOPA6NHQ4 379 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 CASTOR2A6NHX0 329 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 NT5C1B-RDH14C9J2C7 533 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 TMEM189-UBE2V1I3L0A0 370 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 SLC16A3O15427 465 aaKnown RBP17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 ITGB1P05556 798 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 PBX3P40426 434 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 KRT17Q04695 432 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 GPM6BQ13491 265 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 GRIN2CQ14957 1233 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 UPP1Q16831 310 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 DCLRE1AQ6PJP8 1040 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 INTS8Q75QN2 995 aaKnown RBP17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 FILIP1Q7Z7B0 1213 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 WDR49Q8IV35 697 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 SPPL3Q8TCT6 385 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 TMC2Q8TDI7 906 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 PARD3BQ8TEW8 1205 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 TMEM169Q96HH4 297 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 FNBP1Q96RU3 617 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 MARCH5Q9NX47 278 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 TUBGCP4Q9UGJ1 667 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 PRG3Q9Y2Y8 225 aaPredicted RBP17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 RALGAPA2Q2PPJ7 1873 aa17.82■□□□□ 0.44
PACSIN3-210ENST00000533686 CHD9Q3L8U1 2897 aa17.81■□□□□ 0.44
PACSIN3-210ENST00000533686 PODXLO00592 558 aa17.81■□□□□ 0.44
PACSIN3-210ENST00000533686 EPB41P11171 864 aaKnown RBP17.81■□□□□ 0.44
PACSIN3-210ENST00000533686 CLCNKBP51801 687 aa17.81■□□□□ 0.44
PACSIN3-210ENST00000533686 STX17P56962 302 aa17.81■□□□□ 0.44
PACSIN3-210ENST00000533686 CLDN10P78369 228 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms