RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 LMBR1Q8WVP7 490 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 ALG3Q92685 438 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 INO80BQ9C086 356 aaPredicted RBP12.82□□□□□ -0.36
CLP1-205ENST00000533682 SMARCAD1Q9H4L7 1026 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 RRAGCQ9HB90 399 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 C1orf112Q9NSG2 853 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 STIM2Q9P246 746 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 KCNG1Q9UIX4 513 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 AMFRQ9UKV5 643 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 DAAM1Q9Y4D1 1078 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 ALG6Q9Y672 507 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 ASB14A6NK59 587 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 ABLIM1O14639 778 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 DDX3YO15523 660 aaKnown RBP12.82□□□□□ -0.36
CLP1-205ENST00000533682 CELF2O95319 508 aaKnown RBP12.82□□□□□ -0.36
CLP1-205ENST00000533682 SNAI1O95863 264 aaPredicted RBP12.82□□□□□ -0.36
CLP1-205ENST00000533682 PRKCBP05771 671 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 COPB2P35606 906 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 GCNT1Q02742 428 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 MESDQ14696 234 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 EEF1DP3Q658K8 133 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 FMNL3Q8IVF7 1028 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 THNSL1Q8IYQ7 743 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 SHCBP1Q8NEM2 672 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 CPA5Q8WXQ8 436 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 KRT35Q92764 455 aa12.82□□□□□ -0.36
CLP1-205ENST00000533682 NOC2LQ9Y3T9 749 aaKnown RBP12.82□□□□□ -0.36
CLP1-205ENST00000533682 KAT6AQ92794 2004 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 ADCY6O43306 1168 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 RAD51CO43502 376 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 TOM1L1O75674 476 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 LGALS2P05162 132 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 CARSP49589 748 aaKnown RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 GUCY2DQ02846 1103 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 MXD4Q14582 209 aaPredicted RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 MAPK6Q16659 721 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 WDR44Q5JSH3 913 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 CDCA2Q69YH5 1023 aaPredicted RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 SELENOOQ9BVL4 669 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 MRPL4Q9BYD3 311 aaKnown RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 TRIM7Q9C029 511 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 MTMR12Q9C0I1 747 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 DDX47Q9H0S4 455 aaKnown RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 GBA2Q9HCG7 927 aaPredicted RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 EPB41L5Q9HCM4 733 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 RNF14Q9UBS8 474 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 TMEM59LQ9UK28 342 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 DIS3Q9Y2L1 958 aaKnown RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 ATP8B3O60423 1300 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 PHACTR2O75167 634 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 HEXIM1O94992 359 aaKnown RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 ACO1P21399 889 aaKnown RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 GTF2A2P52657 109 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 LLGL1Q15334 1064 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 TMEM270Q6UE05 265 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 PASD1Q8IV76 773 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 SYCE1Q8N0S2 351 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 IFT81Q8WYA0 676 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 RIN2Q8WYP3 895 aaPredicted RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 KCNN1Q92952 543 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 PBKQ96KB5 322 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 KATNBL1Q9H079 304 aa12.81□□□□□ -0.36
CLP1-205ENST00000533682 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.81□□□□□ -0.36
CLP1-205ENST00000533682 LDHAP00338 332 aaKnown RBP12.8□□□□□ -0.36
CLP1-205ENST00000533682 VTNP04004 478 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 TUBBP07437 444 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 GZMAP12544 262 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 ABCD1P33897 745 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 EFNA5P52803 228 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 CCNA1P78396 465 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 NCOA4Q13772 614 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 PRAMEF19Q5SWL8 479 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 CCDC70Q6NSX1 233 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 ZPBP2Q6X784 338 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 GPR142Q7Z601 462 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 DPP9Q86TI2 863 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 ACTRT1Q8TDG2 376 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 AENQ8WTP8 325 aaKnown RBP12.8□□□□□ -0.36
CLP1-205ENST00000533682 TCP11Q8WWU5 503 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 CGRRF1Q99675 332 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.8□□□□□ -0.36
CLP1-205ENST00000533682 NUP85Q9BW27 656 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 ERAP1Q9NZ08 941 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 IVNS1ABPQ9Y6Y0 642 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 KRIT1O00522 736 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 HBP1O60381 514 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 C22orf31O95567 290 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 FGGP02679 453 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 FAM153BP0C7A2 387 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 COMTP21964 271 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 GTF2A1P52655 376 aaPredicted RBP12.8□□□□□ -0.36
CLP1-205ENST00000533682 NOP14P78316 857 aaKnown RBP12.8□□□□□ -0.36
CLP1-205ENST00000533682 CUL2Q13617 745 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 FAM153CQ494X1 144 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 ZNF653Q96CK0 615 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 CYFIP2Q96F07 1278 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 IFT122Q9HBG6 1241 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 FAM153AQ9UHL3 310 aa12.8□□□□□ -0.36
CLP1-205ENST00000533682 NFU1Q9UMS0 254 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms