RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 RPS6KC1Q96S38 1066 aa13.82□□□□□ -0.2
RPUSD4-208ENST00000533628 TTYH1Q9H313 450 aaPredicted RBP13.82□□□□□ -0.2
RPUSD4-208ENST00000533628 ASB7Q9H672 318 aa13.82□□□□□ -0.2
RPUSD4-208ENST00000533628 SLC28A3Q9HAS3 691 aa13.82□□□□□ -0.2
RPUSD4-208ENST00000533628 TMEM51Q9NW97 253 aa13.82□□□□□ -0.2
RPUSD4-208ENST00000533628 NLRC5Q86WI3 1866 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 TMEM265A0A087WTH1 108 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 ZNF233A6NK53 670 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 C5orf67F2Z3F1 127 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 GALTP07902 379 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 BMPR1AP36894 532 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 LRRC63Q05C16 580 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 PPP2R3AQ06190 1150 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 SPAG1Q07617 926 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 SNRNP35Q16560 246 aaKnown RBP13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 PPP2R2DQ66LE6 453 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 KLHL10Q6JEL2 608 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 COLGALT1Q8NBJ5 622 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 PLEKHO2Q8TD55 490 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 TGS1Q96RS0 853 aaKnown RBP13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 TSPAN18Q96SJ8 248 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 TMEM175Q9BSA9 504 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 RBAKQ9NYW8 714 aaPredicted RBP13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 CTNND2Q9UQB3 1225 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 EXOC3O60645 756 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 AKAP3O75969 853 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 IL18RAPO95256 599 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 NR2F2P24468 414 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 SLC11A1P49279 550 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 FXR1P51114 621 aaKnown RBP eCLIP13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 BCAR1P56945 870 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 CYP24A1Q07973 514 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 ADAM9Q13443 819 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 TUSC3Q13454 348 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 EPC2Q52LR7 807 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 TAF3Q5VWG9 929 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 JADE1Q6IE81 842 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 EFCAB13Q8IY85 973 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 TMEM130Q8N3G9 435 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 RDH13Q8NBN7 331 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 SYAP1Q96A49 352 aaPredicted RBP13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 C18orf25Q96B23 403 aaPredicted RBP13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 BORCS6Q96GS4 357 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 SAMD11Q96NU1 681 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 DERAQ9Y315 318 aa13.81□□□□□ -0.2
RPUSD4-208ENST00000533628 EPOPA6NHQ4 379 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 MAPK13O15264 365 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 NFICP08651 508 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 LAG3P18627 525 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 PBX3P40426 434 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 RNASELQ05823 741 aaKnown RBP13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 PAK1Q13153 545 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 PSMD6Q15008 389 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 GPR153Q6NV75 609 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 KCNT2Q6UVM3 1135 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 PAAF1Q9BRP4 392 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 ZNF576Q9H609 170 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 PDE11AQ9HCR9 933 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 CACNG4Q9UBN1 327 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 RWDD2AQ9UIY3 292 aa13.8□□□□□ -0.2
RPUSD4-208ENST00000533628 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 STX17P56962 302 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 FKBP3Q00688 224 aaKnown RBP13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 CD300LGQ6UXG3 332 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 TMEM173Q86WV6 379 aaPredicted RBP13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 SLC39A11Q8N1S5 342 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 NOC3LQ8WTT2 800 aaKnown RBP13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 BCL7CQ8WUZ0 217 aaPredicted RBP13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 ANP32BQ92688 251 aaKnown RBP13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 FAM212AQ96EL1 285 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 TSG101Q99816 390 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 TUBGCP4Q9UGJ1 667 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 RWDD3Q9Y3V2 267 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 C2CD2Q9Y426 696 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 PTPRJQ12913 1337 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 BICDL2A1A5D9 508 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 NRP1O14786 923 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 ZC3H11AO75152 810 aaKnown RBP eCLIP13.79□□□□□ -0.28e-8■■■■■ 44.9
RPUSD4-208ENST00000533628 EFEMP2O95967 443 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 RB1P06400 928 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 CYP3A5P20815 502 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 IGFBP6P24592 240 aaPredicted RBP13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 ERCC5P28715 1186 aaPredicted RBP13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 CLDN10P78369 228 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 CT47A1Q5JQC4 288 aaPredicted RBP13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 SPATA1Q5VX52 437 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 CEP135Q66GS9 1140 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 SASS6Q6UVJ0 657 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 EEF2KMTQ96G04 330 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 ZNF558Q96NG5 402 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 MKNK1Q9BUB5 465 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 PLVAPQ9BX97 442 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 CERS4Q9HA82 394 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 GOLGA2P5Q9HBQ8 144 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 SLC38A7Q9NVC3 462 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 MARCH5Q9NX47 278 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 CHD7Q9P2D1 2997 aa13.79□□□□□ -0.2
RPUSD4-208ENST00000533628 UBQLN1Q9UMX0 589 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms