RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 MIIPQ5JXC2 388 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 MAP1SQ66K74 1059 aaPredicted RBP13.18□□□□□ -0.3
RAD50-209ENST00000533482 C4orf32Q8N8J7 132 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 RBBP8NLQ8NC74 664 aaPredicted RBP13.18□□□□□ -0.3
RAD50-209ENST00000533482 OR6J1Q8NGC5 347 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 TAS1R2Q8TE23 839 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 PPP1R13LQ8WUF5 828 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 SLC35C1Q96A29 364 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 ECM1Q16610 540 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 TSNAXIP1Q2TAA8 658 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 LMNTD2Q8IXW0 634 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 HVCN1Q96D96 273 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 C18orf8Q96DM3 657 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
RAD50-209ENST00000533482 ISCUQ9H1K1 167 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 C2orf40Q9H1Z8 148 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 CYP26B1Q9NR63 512 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 SIK3Q9Y2K2 1263 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 ASB14A6NK59 587 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 MEIS2O14770 477 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 FAM153BP0C7A2 387 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 NOP14P78316 857 aaKnown RBP13.17□□□□□ -0.3
RAD50-209ENST00000533482 MEA1Q16626 185 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 FAM153CQ494X1 144 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 OTOP1Q7RTM1 612 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 ZNF473Q8WTR7 871 aaKnown RBP13.17□□□□□ -0.3
RAD50-209ENST00000533482 SCYL1Q96KG9 808 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 MED15Q96RN5 788 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 ACP6Q9NPH0 428 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 FAM49BQ9NUQ9 324 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 FAM153AQ9UHL3 310 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 INTUQ9ULD6 942 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 F8VZ95 297 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 HUS1O60921 280 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 PHF2O75151 1096 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 CALB1P05937 261 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 HUNKP57058 714 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 MUM1Q2TAK8 710 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 CREG2Q8IUH2 290 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 ARHGAP24Q8N264 748 aa13.17□□□□□ -0.3
RAD50-209ENST00000533482 REXO2Q9Y3B8 237 aaKnown RBP13.17□□□□□ -0.3
RAD50-209ENST00000533482 H0Y3Z8 333 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 TOM1L1O75674 476 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 CHN1P15882 459 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 TBXAS1P24557 533 aaPredicted RBP13.16□□□□□ -0.3
RAD50-209ENST00000533482 SNAPC2Q13487 334 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 FAM83AQ86UY5 434 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 PPM1NQ8N819 430 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 SMC1BQ8NDV3 1235 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 FBXO25Q8TCJ0 367 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 PPP4R1Q8TF05 950 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 SNF8Q96H20 258 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 PRMT1Q99873 361 aaKnown RBP13.16□□□□□ -0.3
RAD50-209ENST00000533482 LBHD1Q9BQE6 289 aaPredicted RBP13.16□□□□□ -0.3
RAD50-209ENST00000533482 KCND2Q9NZV8 630 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 RARRES1P49788 294 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 EFNA5P52803 228 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 SMTNL2Q2TAL5 461 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 SPOPLQ6IQ16 392 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 LRRC55Q6ZSA7 311 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 DNAJC19Q96DA6 116 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 MCEEQ96PE7 176 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 FGFBP2Q9BYJ0 223 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 PXMP2Q9NR77 195 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 RAB21Q9UL25 225 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 CREB3O43889 395 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 ERFP50548 548 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 ZNF157P51786 506 aaPredicted RBP13.16□□□□□ -0.3
RAD50-209ENST00000533482 ARL4CP56559 192 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 NLRP11P59045 1033 aaKnown RBP13.16□□□□□ -0.3
RAD50-209ENST00000533482 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 RWDD4Q6NW29 188 aaKnown RBP13.16□□□□□ -0.3
RAD50-209ENST00000533482 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 MOXD1Q6UVY6 613 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 LRRC31Q6UY01 552 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 ENOSF1Q7L5Y1 443 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 TEX2Q8IWB9 1127 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 ATL2Q8NHH9 583 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
RAD50-209ENST00000533482 MAML1Q92585 1016 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 RAB3IPQ96QF0 476 aaPredicted RBP13.16□□□□□ -0.3
RAD50-209ENST00000533482 TMEM8AQ9HCN3 771 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 UVRAGQ9P2Y5 699 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 TCP11X1B4DZS4 312 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 OATP04181 439 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 BYSLQ13895 437 aaKnown RBP13.16□□□□□ -0.3
RAD50-209ENST00000533482 SLC47A2Q86VL8 602 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 CCHCR1Q8TD31 782 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 CDKL2Q92772 493 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 EPN3Q9H201 632 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 SMARCAD1Q9H4L7 1026 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 IP6K2Q9UHH9 426 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 PCDHB2Q9Y5E7 798 aa13.16□□□□□ -0.3
RAD50-209ENST00000533482 IGSF9BQ9UPX0 1349 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 VWA5AO00534 786 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 KRT3P12035 628 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 CDH6P55285 790 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms