RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 DRG2P55039 364 aaKnown RBP16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 ENPEPQ07075 957 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 STRN3Q13033 797 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 SEZ6Q53EL9 994 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 NOL9Q5SY16 702 aaKnown RBP16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 UBAP2Q5T6F2 1119 aaKnown RBP16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 ENOSF1Q7L5Y1 443 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 MCOLN2Q8IZK6 566 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 R3HDMLQ9H3Y0 253 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 APOBEC3GQ9HC16 384 aaKnown RBP16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 BTBD7Q9P203 1132 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 KIAA1217Q5T5P2 1943 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 IGKV6D-21A0A0A0MT36 114 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 TTLL13PA6NNM8 815 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 H0YCG3 227 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 K7ERI5 159 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 HSPA6P17066 643 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 ACO1P21399 889 aaKnown RBP16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 SCP2P22307 547 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 UBA1P22314 1058 aaKnown RBP16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 RRM1P23921 792 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 MDH1P40925 334 aaKnown RBP16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 RWDD2BP57060 319 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 DRP2Q13474 957 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 CYP1B1Q16678 543 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 SH3D19Q5HYK7 790 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 C10orf67Q8IYJ2 551 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 DNERQ8NFT8 737 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 KIAA1586Q9HCI6 787 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 BCCIPQ9P287 314 aaKnown RBP eCLIP16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 FBXO40Q9UH90 709 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 ANAPC7Q9UJX3 599 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 PCDHB2Q9Y5E7 798 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 MROH7Q68CQ1 1323 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 GSTTP1A0A1W2PQM5 241 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 A6NNZ2 444 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 CLDN3O15551 220 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 SHBGP04278 402 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 SSTR3P32745 418 aaPredicted RBP16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 NAMPTP43490 491 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 ALDH5A1P51649 535 aaPredicted RBP16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 BIRC3Q13489 604 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 TUBB8Q3ZCM7 444 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 DAB2IPQ5VWQ8 1189 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 LBX2Q6XYB7 198 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 CYFIP2Q96F07 1278 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 ANKFY1Q9P2R3 1169 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 PTPN22Q9Y2R2 807 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 SNCAIPQ9Y6H5 919 aa16.41■□□□□ 0.22
CACNA1E-208ENST00000533229 GGPS1O95749 300 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 MAPK4P31152 587 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 COILP38432 576 aaPredicted RBP16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 PIK3CAP42336 1068 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 SEC24CP53992 1094 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 VGLL4Q14135 290 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 WDR44Q5JSH3 913 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 CHST13Q8NET6 341 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 OR5B17Q8NGF7 314 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 DEPTORQ8TB45 409 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 SLC7A3Q8WY07 619 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 BBXQ8WY36 941 aaPredicted RBP16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 RNF25Q96BH1 459 aaPredicted RBP16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 HERPUD2Q9BSE4 406 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 NIFKQ9BYG3 293 aaKnown RBP16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 SLC12A6Q9UHW9 1150 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 NOVA2Q9UNW9 492 aaKnown RBP16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 A0A0B4J269 797 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 FARP2O94887 1054 aaPredicted RBP16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 PIGRP01833 764 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 CYP1A1P04798 512 aaPredicted RBP16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 RUFY4Q6ZNE9 571 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 CCDC105Q8IYK2 499 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 KCNN1Q92952 543 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 RASAL2Q9UJF2 1139 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 UMODL1Q5DID0 1318 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 ADGRA2Q96PE1 1338 aa16.4■□□□□ 0.22
CACNA1E-208ENST00000533229 ARID2Q68CP9 1835 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 SOWAHBA6NEL2 793 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 PODXLO00592 558 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 NDUFAB1O14561 156 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 PMS2P54278 862 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 SLC20A2Q08357 652 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 TARBP2Q15633 366 aaKnown RBP16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 PTGISQ16647 500 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 KRT71Q3SY84 523 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 SGIP1Q9BQI5 828 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 MSTO1Q9BUK6 570 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 EPN3Q9H201 632 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 CNTNAP2Q9UHC6 1331 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 VGLL3A8MV65 326 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 O00370 1275 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 TMOD1P28289 359 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 ABCD1P33897 745 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 CENPCQ03188 943 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 CUL2Q13617 745 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 CAPSQ13938 189 aa16.39■□□□□ 0.21
CACNA1E-208ENST00000533229 MON1BQ7L1V2 547 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms