RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 BSNDQ8WZ55 320 aa14.37□□□□□ -0.11
COPB1-209ENST00000533096 CLDN23Q96B33 292 aa14.37□□□□□ -0.11
COPB1-209ENST00000533096 TCEAL4Q96EI5 215 aa14.37□□□□□ -0.11
COPB1-209ENST00000533096 BORCS6Q96GS4 357 aa14.37□□□□□ -0.11
COPB1-209ENST00000533096 CYP4F11Q9HBI6 524 aa14.37□□□□□ -0.11
COPB1-209ENST00000533096 GOLGA2P5Q9HBQ8 144 aa14.37□□□□□ -0.11
COPB1-209ENST00000533096 BRMS1Q9HCU9 246 aa14.37□□□□□ -0.11
COPB1-209ENST00000533096 TPCN1Q9ULQ1 816 aa14.37□□□□□ -0.11
COPB1-209ENST00000533096 EP300Q09472 2414 aaPredicted RBP14.37□□□□□ -0.11
COPB1-209ENST00000533096 TRAPPC3O43617 180 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 MAGEA9P43362 315 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 OSTNP61366 133 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 NAB2Q15742 525 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 FAM78AQ5JUQ0 283 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 CATSPER3Q86XQ3 398 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 FAM3CQ92520 227 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 WASF1Q92558 559 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 PRIMPOLQ96LW4 560 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 NACC1Q96RE7 527 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 KIFC3Q9BVG8 833 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 TRMT61BQ9BVS5 477 aaKnown RBP14.36□□□□□ -0.11
COPB1-209ENST00000533096 TM6SF1Q9BZW5 370 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 C2orf40Q9H1Z8 148 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 EPC1Q9H2F5 836 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 ZFP14Q9HCL3 533 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 PARD6AQ9NPB6 346 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 GDE1Q9NZC3 331 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 MTRRQ9UBK8 725 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 GVINP1Q7Z2Y8 2422 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 COL4A3Q01955 1670 aa14.36□□□□□ -0.11
COPB1-209ENST00000533096 DMDP11532 3685 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.35□□□□□ -0.11
COPB1-209ENST00000533096 ARHGEF35A5YM69 484 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 BTBD18B2RXH4 712 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 ACKR2O00590 384 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 MAN2B1O00754 1011 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 WNT7AO00755 349 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 NEMFO60524 1076 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 LILRB5O75023 590 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 MED24O75448 989 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 CTDNEP1O95476 244 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 SPATA31C1P0DKV0 1188 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 MYL4P12829 197 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 GJA1P17302 382 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 TGM1P22735 817 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 GDI1P31150 447 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 MCM7P33993 719 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 RPS9P46781 194 aaKnown RBP14.35□□□□□ -0.11
COPB1-209ENST00000533096 FAM187BQ17R55 369 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 PADI6Q6TGC4 694 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 ANKS3Q6ZW76 656 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 HS6ST3Q8IZP7 471 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 MCPH1Q8NEM0 835 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 ELSPBP1Q96BH3 223 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 ZSWIM3Q96MP5 696 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 BACE2Q9Y5Z0 518 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.35□□□□□ -0.11
COPB1-209ENST00000533096 VPS13AQ96RL7 3174 aa14.35□□□□□ -0.11
COPB1-209ENST00000533096 DENND4AQ7Z401 1863 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 NRG2O14511 850 aaPredicted RBP14.34□□□□□ -0.11
COPB1-209ENST00000533096 PFKFB2O60825 505 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 SEC24AO95486 1093 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 EDN1P05305 212 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 FDPSP14324 419 aaKnown RBP14.34□□□□□ -0.11
COPB1-209ENST00000533096 VIPR2P41587 438 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 CYP4A22Q5TCH4 519 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 NT5DC1Q5TFE4 455 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 CD300LGQ6UXG3 332 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 ZNF461Q8TAF7 563 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 DDX27Q96GQ7 796 aaKnown RBP14.34□□□□□ -0.11
COPB1-209ENST00000533096 ZNF512Q96ME7 567 aaPredicted RBP14.34□□□□□ -0.11
COPB1-209ENST00000533096 RTKNQ9BST9 563 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 TMEM60Q9H2L4 133 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 C2orf16Q68DN1 1984 aa14.34□□□□□ -0.11
COPB1-209ENST00000533096 SMIM28A0A1B0GU29 152 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 SHISA7A6NL88 538 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 ZNF197O14709 1029 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 CYP11B2P19099 503 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 CCNE1P24864 410 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 YARSP54577 528 aaKnown RBP14.33□□□□□ -0.12
COPB1-209ENST00000533096 NRLP54845 237 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 ROR1Q01973 937 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 SIM2Q14190 667 aaPredicted RBP14.33□□□□□ -0.12
COPB1-209ENST00000533096 PPP2R5DQ14738 602 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 UPP1Q16831 310 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 ATF7IP2Q5U623 682 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 CDCA2Q69YH5 1023 aaPredicted RBP14.33□□□□□ -0.12
COPB1-209ENST00000533096 HEATR6Q6AI08 1181 aaKnown RBP14.33□□□□□ -0.12
COPB1-209ENST00000533096 IQCEQ6IPM2 695 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 PDZD4Q76G19 769 aaPredicted RBP14.33□□□□□ -0.12
COPB1-209ENST00000533096 CELF5Q8N6W0 485 aaKnown RBP14.33□□□□□ -0.12
COPB1-209ENST00000533096 C3orf58Q8NDZ4 430 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 TTC8Q8TAM2 541 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 NELL1Q92832 810 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 IRF7Q92985 503 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 IFT74Q96LB3 600 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 PPP1R10Q96QC0 940 aaKnown RBP14.33□□□□□ -0.12
COPB1-209ENST00000533096 MTMR9Q96QG7 549 aa14.33□□□□□ -0.12
COPB1-209ENST00000533096 TCHPQ9BT92 498 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms