RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 AXDND1Q5T1B0 1012 aaPredicted RBP18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 PDXDC1Q6P996 788 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 PARM1Q6UWI2 310 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 KCNK18Q7Z418 384 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 ITFG1Q8TB96 612 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 ACO2Q99798 780 aaKnown RBP18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 RUSC1Q9BVN2 902 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 ARHGEF3Q9NR81 526 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 HCFC1R1Q9NWW0 138 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 MTRRQ9UBK8 725 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 CDH7Q9ULB5 785 aa18.77■□□□□ 0.6
RPUSD4-207ENST00000532800 CITO14578 2027 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 SMIM28A0A1B0GU29 152 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 HIP1RO75146 1068 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 GRM5P41594 1212 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 BRCC3P46736 316 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 MAPK7Q13164 816 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 ZNF568Q3ZCX4 644 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 DCLRE1AQ6PJP8 1040 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 FGF13Q92913 245 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 NKD2Q969F2 451 aaPredicted RBP18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 DDX27Q96GQ7 796 aaKnown RBP18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 TARS2Q9BW92 718 aaKnown RBP18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 PTPRHQ9HD43 1115 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 CDY1Q9Y6F8 540 aa18.76■□□□□ 0.59
RPUSD4-207ENST00000532800 XYLBO75191 536 aa18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 DCNP07585 359 aaKnown RBP18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 DMP1Q13316 513 aaPredicted RBP18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 SPECC1Q5M775 1068 aa18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 UROC1Q96N76 676 aa18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 ZMAT2Q96NC0 199 aaKnown RBP18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 MMTAG2Q9BU76 263 aaKnown RBP18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 CCDC94Q9BW85 323 aaPredicted RBP18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 RAB34Q9BZG1 259 aa18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 SLC2A4RGQ9NR83 387 aa18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 ARHGAP28Q9P2N2 729 aa18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 DNM3Q9UQ16 869 aa18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 ZFP37Q9Y6Q3 630 aaPredicted RBP18.75■□□□□ 0.59
RPUSD4-207ENST00000532800 PDCD11Q14690 1871 aaKnown RBP18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 ABLIM1O14639 778 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 YARSP54577 528 aaKnown RBP18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 GPC5P78333 572 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 XKR4Q5GH76 650 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 KRT79Q5XKE5 535 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 RINT1Q6NUQ1 792 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 ALKAL1Q6UXT8 129 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 APBB1IPQ7Z5R6 666 aaPredicted RBP18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 SNX27Q96L92 541 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 MRPL4Q9BYD3 311 aaKnown RBP18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 FOXQ1Q9C009 403 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 TMEM134Q9H6X4 195 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 KMT5AQ9NQR1 393 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 DNMT3BQ9UBC3 853 aaKnown RBP18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 STK24Q9Y6E0 443 aa18.74■□□□□ 0.59
RPUSD4-207ENST00000532800 MYH11P35749 1972 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 SPTBN4Q9H254 2564 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 MIA3Q5JRA6 1907 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 SFI1A8K8P3 1242 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 PODXLO00592 558 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 SLC16A4O15374 487 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 MEFVO15553 781 aaPredicted RBP18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 POU2F2P09086 479 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 HARSP12081 509 aaKnown RBP18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 PHLDB3Q6NSJ2 640 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 ANKS3Q6ZW76 656 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 C1orf186Q6ZWK4 172 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 NPAS3Q8IXF0 933 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 ING5Q8WYH8 240 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 DRC1Q96MC2 740 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 TOPORSQ9NS56 1045 aaPredicted RBP18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 DLGAP2Q9P1A6 1054 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 BACE2Q9Y5Z0 518 aa18.73■□□□□ 0.59
RPUSD4-207ENST00000532800 WDR87Q6ZQQ6 2873 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 LRRN2O75325 713 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 PROZP22891 400 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 PRPHP41219 470 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 ROR1Q01973 937 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 RAD51AP2Q09MP3 1159 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 ZRSR1Q15695 479 aaKnown RBP18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 UVSSAQ2YD98 709 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 C8orf34Q49A92 452 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 PABPC1LQ4VXU2 614 aaKnown RBP18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 DTHD1Q6ZMT9 781 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 C18orf25Q96B23 403 aaPredicted RBP18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 ZBTB45Q96K62 511 aaPredicted RBP18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 KXD1Q9BQD3 176 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 SIT1Q9Y3P8 196 aa18.72■□□□□ 0.59
RPUSD4-207ENST00000532800 LAD1O00515 517 aa18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 TRAPPC3O43617 180 aa18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 MCF2P10911 925 aa18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 GLULP15104 373 aa18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 SLC5A9Q2M3M2 681 aa18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 SEZ6Q53EL9 994 aa18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 VARS2Q5ST30 1063 aaKnown RBP18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 POTEHQ6S545 545 aa18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 MPZL3Q6UWV2 235 aa18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 MTSS1LQ765P7 747 aa18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 ADSSL1Q8N142 457 aa18.71■□□□□ 0.59
RPUSD4-207ENST00000532800 TMEM130Q8N3G9 435 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms