RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 SSRP1Q08945 709 aaKnown RBP9.94□□□□□ -0.82
USF1-210ENST00000531842 TUSC3Q13454 348 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 TOB2Q14106 344 aaPredicted RBP9.94□□□□□ -0.82
USF1-210ENST00000531842 EPHA7Q15375 998 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 SF3A2Q15428 464 aaKnown RBP9.94□□□□□ -0.82
USF1-210ENST00000531842 SLC27A1Q6PCB7 646 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 BLOC1S2Q6QNY1 142 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 ZNF852Q6ZMS4 543 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 Q6ZS52 159 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 C4orf19Q8IY42 314 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 TCP11Q8WWU5 503 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 BSNDQ8WZ55 320 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 SECISBP2LQ93073 1101 aaKnown RBP9.94□□□□□ -0.82
USF1-210ENST00000531842 CORO1BQ9BR76 489 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 PDZD7Q9H5P4 517 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 LMAN1LQ9HAT1 526 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 SH3GLB2Q9NR46 395 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 SEMA4GQ9NTN9 838 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 GDAQ9Y2T3 454 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 ZFP37Q9Y6Q3 630 aaPredicted RBP9.94□□□□□ -0.82
USF1-210ENST00000531842 ANKRD11Q6UB99 2663 aaPredicted RBP9.93□□□□□ -0.82
USF1-210ENST00000531842 FASNP49327 2511 aaKnown RBP9.93□□□□□ -0.82
USF1-210ENST00000531842 A0A1B0GUA9 196 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 LRRIQ4A6NIV6 560 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 ASAP2O43150 1006 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 CDC45O75419 566 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 ECI2O75521 394 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 SEC24AO95486 1093 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 AXLP30530 894 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 RPS9P46781 194 aaKnown RBP9.93□□□□□ -0.82
USF1-210ENST00000531842 PXNP49023 591 aaPredicted RBP9.93□□□□□ -0.82
USF1-210ENST00000531842 CLCNKBP51801 687 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 CDR1P51861 262 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 PFKPQ01813 784 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 COL9A2Q14055 689 aaPredicted RBP9.93□□□□□ -0.82
USF1-210ENST00000531842 RAB33AQ14088 237 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 PRSS36Q5K4E3 855 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 N4BP2L1Q5TBK1 243 aaPredicted RBP9.93□□□□□ -0.82
USF1-210ENST00000531842 VITQ6UXI7 678 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 PRR23CQ6ZRP0 262 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 PIK3AP1Q6ZUJ8 805 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 GPR161Q8N6U8 529 aaKnown RBP9.93□□□□□ -0.82
USF1-210ENST00000531842 RSPRY1Q96DX4 576 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 CCDC51Q96ER9 411 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
USF1-210ENST00000531842 EIF2AK1Q9BQI3 630 aaKnown RBP9.93□□□□□ -0.82
USF1-210ENST00000531842 AGXT2Q9BYV1 514 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 CHRDQ9H2X0 955 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 BRD9Q9H8M2 597 aa9.93□□□□□ -0.82
USF1-210ENST00000531842 POLR3BQ9NW08 1133 aaPredicted RBP9.93□□□□□ -0.82
USF1-210ENST00000531842 MOSPD3O75425 235 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 PRKCBP05771 671 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 FGFR3P22607 806 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 CCNE1P24864 410 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 GDI1P31150 447 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 FOSBP53539 338 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 ROR1Q01973 937 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 SOX4Q06945 474 aaPredicted RBP9.92□□□□□ -0.82
USF1-210ENST00000531842 SIM2Q14190 667 aaPredicted RBP9.92□□□□□ -0.82
USF1-210ENST00000531842 MXD4Q14582 209 aaPredicted RBP9.92□□□□□ -0.82
USF1-210ENST00000531842 LAIR1Q6GTX8 287 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 MOXD1Q6UVY6 613 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 OTUD6AQ7L8S5 288 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
USF1-210ENST00000531842 DAGLBQ8NCG7 672 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 NETO1Q8TDF5 533 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 KCNB2Q92953 911 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 KIFC3Q9BVG8 833 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 ZSWIM4Q9H7M6 989 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 MTRRQ9UBK8 725 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 RAB23Q9ULC3 237 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 PIAS3Q9Y6X2 628 aa9.92□□□□□ -0.82
USF1-210ENST00000531842 DSPP15924 2871 aaKnown RBP9.91□□□□□ -0.82
USF1-210ENST00000531842 WDR27A2RRH5 827 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 SLC38A8A6NNN8 435 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 AXIN1O15169 862 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 MARCH6O60337 910 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 C1RP00736 705 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 THP07101 528 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 RETP07949 1114 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 CHRNB1P11230 501 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 SDHBP21912 280 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 HOXA9P31269 272 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 CREMQ03060 361 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 NR5A1Q13285 461 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 TFDP1Q14186 410 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 STXBP5Q5T5C0 1151 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 PKN3Q6P5Z2 889 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 TXNDC11Q6PKC3 985 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 KRT25Q7Z3Z0 450 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.91□□□□□ -0.82
USF1-210ENST00000531842 NEK8Q86SG6 692 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 GPR65Q8IYL9 337 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 FAM160A2Q8N612 972 aaPredicted RBP9.91□□□□□ -0.82
USF1-210ENST00000531842 CEP120Q8N960 986 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 FAM3CQ92520 227 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 ELSPBP1Q96BH3 223 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 FAM20AQ96MK3 541 aa9.91□□□□□ -0.82
USF1-210ENST00000531842 ZNF334Q9HCZ1 680 aaPredicted RBP9.91□□□□□ -0.82
USF1-210ENST00000531842 ZNF638Q14966 1978 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms