RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ZNF778Q96MU6 729 aa6.46□□□□□ -1.38
PTPRK-220ENST00000531466 UNKLQ9H9P5 680 aaKnown RBP6.46□□□□□ -1.38
PTPRK-220ENST00000531466 SIK3Q9Y2K2 1263 aa6.46□□□□□ -1.38
PTPRK-220ENST00000531466 CGB1A6NKQ9 187 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 PROP1O75360 226 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 PRSS23O95084 383 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 GCSHP23434 173 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 PROK1P58294 105 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 CDK17Q00537 523 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 CYP2A13Q16696 494 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 LCE1AQ5T7P2 110 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 NIM1KQ8IY84 436 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 STON2Q8WXE9 905 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 UHRF1Q96T88 793 aaPredicted RBP6.45□□□□□ -1.38
PTPRK-220ENST00000531466 HEPHQ9BQS7 1158 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 BCO1Q9HAY6 547 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 KCTD5Q9NXV2 234 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 ARPP21Q9UBL0 812 aaPredicted RBP6.45□□□□□ -1.38
PTPRK-220ENST00000531466 DMTF1Q9Y222 760 aa6.45□□□□□ -1.38
PTPRK-220ENST00000531466 MTO1Q9Y2Z2 717 aaKnown RBP6.45□□□□□ -1.38
PTPRK-220ENST00000531466 PROB1E7EW31 1015 aa6.44□□□□□ -1.38
PTPRK-220ENST00000531466 POMCP01189 267 aa6.44□□□□□ -1.38
PTPRK-220ENST00000531466 ATP5JP18859 108 aa6.44□□□□□ -1.38
PTPRK-220ENST00000531466 SP140Q13342 867 aa6.44□□□□□ -1.38
PTPRK-220ENST00000531466 FOXR2Q6PJQ5 311 aa6.44□□□□□ -1.38
PTPRK-220ENST00000531466 ZNF788Q6ZQV5 615 aa6.44□□□□□ -1.38
PTPRK-220ENST00000531466 THNSL2Q86YJ6 484 aa6.44□□□□□ -1.38
PTPRK-220ENST00000531466 HOMER1Q86YM7 354 aa6.44□□□□□ -1.38
PTPRK-220ENST00000531466 AHI1Q8N157 1196 aa6.44□□□□□ -1.38
PTPRK-220ENST00000531466 ECHS1P30084 290 aa6.43□□□□□ -1.38
PTPRK-220ENST00000531466 VAV2P52735 878 aa6.43□□□□□ -1.38
PTPRK-220ENST00000531466 UBXN2BQ14CS0 331 aa6.43□□□□□ -1.38
PTPRK-220ENST00000531466 GEN1Q17RS7 908 aa6.43□□□□□ -1.38
PTPRK-220ENST00000531466 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPRK-220ENST00000531466 ATP13A4Q4VNC1 1196 aa6.43□□□□□ -1.38
PTPRK-220ENST00000531466 C1QL2Q7Z5L3 287 aa6.43□□□□□ -1.38
PTPRK-220ENST00000531466 GPR156Q8NFN8 814 aa6.43□□□□□ -1.38
PTPRK-220ENST00000531466 RNPC3Q96LT9 517 aaKnown RBP6.43□□□□□ -1.38
PTPRK-220ENST00000531466 LDAHQ9H6V9 325 aa6.43□□□□□ -1.38
PTPRK-220ENST00000531466 TOPORSQ9NS56 1045 aaPredicted RBP6.43□□□□□ -1.38
PTPRK-220ENST00000531466 FBXO34Q9NWN3 711 aa6.43□□□□□ -1.38
PTPRK-220ENST00000531466 ERN1O75460 977 aaKnown RBP6.42□□□□□ -1.38
PTPRK-220ENST00000531466 SREBF1P36956 1147 aa6.42□□□□□ -1.38
PTPRK-220ENST00000531466 ALDH1A3P47895 512 aa6.42□□□□□ -1.38
PTPRK-220ENST00000531466 FSCN1Q16658 493 aaKnown RBP6.42□□□□□ -1.38
PTPRK-220ENST00000531466 ZNF529Q6P280 563 aa6.42□□□□□ -1.38
PTPRK-220ENST00000531466 C16orf86Q6ZW13 317 aa6.42□□□□□ -1.38
PTPRK-220ENST00000531466 PQLC1Q8N2U9 271 aa6.42□□□□□ -1.38
PTPRK-220ENST00000531466 SSH3Q8TE77 659 aa6.42□□□□□ -1.38
PTPRK-220ENST00000531466 UROC1Q96N76 676 aa6.42□□□□□ -1.38
PTPRK-220ENST00000531466 C1QTNF7Q9BXJ2 289 aa6.42□□□□□ -1.38
PTPRK-220ENST00000531466 KMT5AQ9NQR1 393 aa6.42□□□□□ -1.38
PTPRK-220ENST00000531466 MOCS1Q9NZB8 636 aa6.42□□□□□ -1.38
PTPRK-220ENST00000531466 WDR91A4D1P6 747 aa6.41□□□□□ -1.38
PTPRK-220ENST00000531466 PEX1O43933 1283 aa6.41□□□□□ -1.38
PTPRK-220ENST00000531466 ZFPL1O95159 310 aa6.41□□□□□ -1.38
PTPRK-220ENST00000531466 PER3P56645 1201 aa6.41□□□□□ -1.38
PTPRK-220ENST00000531466 LNX2Q8N448 690 aa6.41□□□□□ -1.38
PTPRK-220ENST00000531466 ZNF366Q8N895 744 aa6.41□□□□□ -1.38
PTPRK-220ENST00000531466 DDB2Q92466 427 aa6.41□□□□□ -1.38
PTPRK-220ENST00000531466 SENP6Q9GZR1 1112 aaPredicted RBP6.41□□□□□ -1.38
PTPRK-220ENST00000531466 IL2RBP14784 551 aa6.4□□□□□ -1.38
PTPRK-220ENST00000531466 UBE3BQ7Z3V4 1068 aa6.4□□□□□ -1.38
PTPRK-220ENST00000531466 COLGALT2Q8IYK4 626 aa6.4□□□□□ -1.38
PTPRK-220ENST00000531466 TSPEARQ8WU66 669 aa6.4□□□□□ -1.38
PTPRK-220ENST00000531466 LEO1Q8WVC0 666 aaPredicted RBP6.4□□□□□ -1.38
PTPRK-220ENST00000531466 MARS2Q96GW9 593 aaKnown RBP6.4□□□□□ -1.38
PTPRK-220ENST00000531466 RAX2Q96IS3 184 aa6.4□□□□□ -1.38
PTPRK-220ENST00000531466 MYOCQ99972 504 aa6.4□□□□□ -1.38
PTPRK-220ENST00000531466 CPNE5Q9HCH3 593 aa6.4□□□□□ -1.38
PTPRK-220ENST00000531466 FANCLQ9NW38 375 aa6.4□□□□□ -1.38
PTPRK-220ENST00000531466 CKBP12277 381 aa6.39□□□□□ -1.39
PTPRK-220ENST00000531466 FPR1P21462 350 aa6.39□□□□□ -1.39
PTPRK-220ENST00000531466 ENPP1P22413 925 aa6.39□□□□□ -1.39
PTPRK-220ENST00000531466 SF3B3Q15393 1217 aaKnown RBP6.39□□□□□ -1.39
PTPRK-220ENST00000531466 CCDC144BQ3MJ40 725 aa6.39□□□□□ -1.39
PTPRK-220ENST00000531466 C9orf106Q8NAJ2 232 aa6.39□□□□□ -1.39
PTPRK-220ENST00000531466 DMRT3Q9NQL9 472 aa6.39□□□□□ -1.39
PTPRK-220ENST00000531466 LANCL2Q9NS86 450 aa6.39□□□□□ -1.39
PTPRK-220ENST00000531466 HSFX1Q9UBD0 423 aa6.39□□□□□ -1.39
PTPRK-220ENST00000531466 ZNF70Q9UC06 446 aaPredicted RBP6.39□□□□□ -1.39
PTPRK-220ENST00000531466 SLC23A1Q9UHI7 598 aa6.39□□□□□ -1.39
PTPRK-220ENST00000531466 AJAP1Q9UKB5 411 aaPredicted RBP6.39□□□□□ -1.39
PTPRK-220ENST00000531466 TRGV11A0A075B6L2 103 aa6.38□□□□□ -1.39
PTPRK-220ENST00000531466 WIPF3A6NGB9 483 aa6.38□□□□□ -1.39
PTPRK-220ENST00000531466 MANSC4A6NHS7 340 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-220ENST00000531466 CTGFP29279 349 aa6.38□□□□□ -1.39
PTPRK-220ENST00000531466 GUCY1A2P33402 732 aa6.38□□□□□ -1.39
PTPRK-220ENST00000531466 ADRM1Q16186 407 aa6.38□□□□□ -1.39
PTPRK-220ENST00000531466 OTUD7BQ6GQQ9 843 aa6.38□□□□□ -1.39
PTPRK-220ENST00000531466 APPBP2Q92624 585 aa6.38□□□□□ -1.39
PTPRK-220ENST00000531466 ACAP3Q96P50 834 aa6.38□□□□□ -1.39
PTPRK-220ENST00000531466 FAM30AQ9NZY2 134 aa6.38□□□□□ -1.39
PTPRK-220ENST00000531466 GSG1L2A8MUP6 293 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 GPD1P21695 349 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 FOLR3P41439 243 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 NOMO3P69849 1222 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 NOMO1Q15155 1222 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 NOMO2Q5JPE7 1267 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 GRASPQ7Z6J2 395 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms