RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 RMDN1Q96DB5 314 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 IFT74Q96LB3 600 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 BCO2Q9BYV7 579 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 MTF2Q9Y483 593 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-219ENST00000530495 CDY1Q9Y6F8 540 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 EP300Q09472 2414 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-219ENST00000530495 FRYLO94915 3013 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 FAM170BA6NMN3 283 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 OR52Z1P0C646 297 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 NEK4P51957 841 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 SAFBQ15424 915 aaKnown RBP eCLIP16.42■□□□□ 0.22
CAPN1-219ENST00000530495 ZNF174Q15697 407 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 ATF7IP2Q5U623 682 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 ALKAL1Q6UXT8 129 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 APBB1IPQ7Z5R6 666 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-219ENST00000530495 SUMF1Q8NBK3 374 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 ZNF461Q8TAF7 563 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 KIFAP3Q92845 792 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 NELL2Q99435 816 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 KXD1Q9BQD3 176 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 POLD4Q9HCU8 107 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 AVENQ9NQS1 362 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-219ENST00000530495 FBXO4Q9UKT5 387 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 TNFSF13BQ9Y275 285 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 COL4A3Q01955 1670 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 PATJQ8NI35 1801 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 DMXL1Q9Y485 3027 aa16.42■□□□□ 0.22
CAPN1-219ENST00000530495 SMIM28A0A1B0GU29 152 aa16.41■□□□□ 0.22
CAPN1-219ENST00000530495 K7ERI5 159 aa16.41■□□□□ 0.22
CAPN1-219ENST00000530495 ECI2O75521 394 aa16.41■□□□□ 0.22
CAPN1-219ENST00000530495 TKTP29401 623 aaKnown RBP16.41■□□□□ 0.22
CAPN1-219ENST00000530495 ST3GAL1Q11201 340 aa16.41■□□□□ 0.22
CAPN1-219ENST00000530495 XKR4Q5GH76 650 aa16.41■□□□□ 0.22
CAPN1-219ENST00000530495 GLRA4Q5JXX5 417 aa16.41■□□□□ 0.22
CAPN1-219ENST00000530495 SLC8B1Q6J4K2 584 aa16.41■□□□□ 0.22
CAPN1-219ENST00000530495 C3orf58Q8NDZ4 430 aa16.41■□□□□ 0.22
CAPN1-219ENST00000530495 DDX27Q96GQ7 796 aaKnown RBP16.41■□□□□ 0.22
CAPN1-219ENST00000530495 KIFC3Q9BVG8 833 aa16.41■□□□□ 0.22
CAPN1-219ENST00000530495 SPATA6Q9NWH7 488 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-219ENST00000530495 GDE1Q9NZC3 331 aa16.41■□□□□ 0.22
CAPN1-219ENST00000530495 MRPS23Q9Y3D9 190 aaKnown RBP16.41■□□□□ 0.22
CAPN1-219ENST00000530495 ARHGEF37A1IGU5 675 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 LAMTOR5O43504 91 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 KINO60870 393 aaKnown RBP16.4■□□□□ 0.22
CAPN1-219ENST00000530495 ABLIM3O94929 683 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 RHOP08100 348 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 PTPN2P17706 415 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 MAGEA9P43362 315 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 UBXN2BQ14CS0 331 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 ECM1Q16610 540 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 ZBTB41Q5SVQ8 909 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 HAUS3Q68CZ6 603 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 DCLK2Q8N568 766 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 ING5Q8WYH8 240 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 CLDN23Q96B33 292 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 MCRS1Q96EZ8 462 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 PLA2G2FQ9BZM2 168 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 BHMT2Q9H2M3 363 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 FOXP1Q9H334 677 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-219ENST00000530495 GOLGA2P5Q9HBQ8 144 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 PTPRHQ9HD43 1115 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 LTB4R2Q9NPC1 389 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 CACNA1AO00555 2505 aa16.4■□□□□ 0.22
CAPN1-219ENST00000530495 I3L4J1 428 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 CD72P21854 359 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 CCT6AP40227 531 aaKnown RBP16.39■□□□□ 0.21
CAPN1-219ENST00000530495 GRM5P41594 1212 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 BRCC3P46736 316 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 FXR2P51116 673 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■□□□□ 9.6
CAPN1-219ENST00000530495 SOX4Q06945 474 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-219ENST00000530495 PDIA5Q14554 519 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 PUM1Q14671 1186 aaKnown RBP eCLIP16.39■□□□□ 0.21
CAPN1-219ENST00000530495 SLC5A9Q2M3M2 681 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 POTEHQ6S545 545 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 C4orf32Q8N8J7 132 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 ACO2Q99798 780 aaKnown RBP16.39■□□□□ 0.21
CAPN1-219ENST00000530495 HINFPQ9BQA5 517 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 TMEM134Q9H6X4 195 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 TOPORSQ9NS56 1045 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-219ENST00000530495 SLC38A7Q9NVC3 462 aa16.39■□□□□ 0.21
CAPN1-219ENST00000530495 OTOGLQ3ZCN5 2332 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 NCAM2O15394 837 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 TBC1D4O60343 1298 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 ATF2P15336 505 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 RPS9P46781 194 aaKnown RBP16.38■□□□□ 0.21
CAPN1-219ENST00000530495 YARSP54577 528 aaKnown RBP16.38■□□□□ 0.21
CAPN1-219ENST00000530495 ROR1Q01973 937 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 CSTF1Q05048 431 aaKnown RBP16.38■□□□□ 0.21
CAPN1-219ENST00000530495 TTC38Q5R3I4 469 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 DGLUCYQ7Z3D6 616 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 TCEAL8Q8IYN2 117 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 CEP120Q8N960 986 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 NELL1Q92832 810 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 ELSPBP1Q96BH3 223 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 C8orf76Q96K31 380 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 CCDC94Q9BW85 323 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-219ENST00000530495 DLL3Q9NYJ7 618 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 LRWD1Q9UFC0 647 aa16.38■□□□□ 0.21
CAPN1-219ENST00000530495 KIAA1024Q9UPX6 916 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms