RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 IGF2BP3O00425 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 NMT1P30419 496 aaKnown RBP16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 NBPF20Q3BBV1 942 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 GPR101Q96P66 508 aaPredicted RBP16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 CELF4Q9BZC1 486 aaKnown RBP16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 CD248Q9HCU0 757 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 MRGBPQ9NV56 204 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 PSMC3IPQ9P2W1 217 aaPredicted RBP16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 GABBR1Q9UBS5 961 aa16.3■□□□□ 0.2
PCDHA4-203ENST00000530339 KDSRQ06136 332 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 GFM2Q969S9 779 aaKnown RBP16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 MTIF3Q9H2K0 278 aaKnown RBP16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 ADA2Q9NZK5 511 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 SLC9A1P19634 815 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 KCNA3P22001 575 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 SLC29A2Q14542 456 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 TMEM259Q4ZIN3 620 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 C16orf86Q6ZW13 317 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 RYBPQ8N488 228 aaPredicted RBP16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 ACAP3Q96P50 834 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 ALG13Q9NP73 1137 aaKnown RBP16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 HEATR6Q6AI08 1181 aaKnown RBP16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 TMEM154Q6P9G4 183 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 HHIPL2Q6UWX4 724 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 C4orf50Q6ZRC1 276 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 CASKIN2Q8WXE0 1202 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 ZNF560Q96MR9 790 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 ANKZF1Q9H8Y5 726 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 SPON1Q9HCB6 807 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 GTSE1Q9NYZ3 720 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 DGAT1O75907 488 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 RFX5P48382 616 aaPredicted RBP16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 P3H1Q32P28 736 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 RIBC1Q8N443 379 aaPredicted RBP16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 ARL8AQ96BM9 186 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 CARD9Q9H257 536 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 RBAKQ9NYW8 714 aaPredicted RBP16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 L3MBTL1Q9Y468 752 aa16.29■□□□□ 0.2
PCDHA4-203ENST00000530339 NPHP3-ACAD11A0A0J9YXS1 232 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 H3BRJ5 948 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 AKR1B1P15121 316 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 FIGNQ5HY92 759 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 XRRA1Q6P2D8 792 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 EPB41L4AQ9HCS5 686 aaPredicted RBP16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 UBN1Q9NPG3 1134 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 ENO1P06733 434 aaKnown RBP16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 TYK2P29597 1187 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 TSPY1Q01534 308 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 Q3C1V9 767 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 C4orf33Q8N1A6 199 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 GRIN3BO60391 1043 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 CUL3Q13618 768 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 TMTC4Q5T4D3 741 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 ANKMY2Q8IV38 441 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 EHD2Q9NZN4 543 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 BFARQ9NZS9 450 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 RAB21Q9UL25 225 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 C21orf2O43822 256 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 CDK17Q00537 523 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 KYNUQ16719 465 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 STRIP1Q5VSL9 837 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 CCNYL1Q8N7R7 359 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 ZMAT2Q96NC0 199 aaKnown RBP16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 PABPC3Q9H361 631 aaKnown RBP16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 VCPKMTQ9H867 229 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 NEU2Q9Y3R4 380 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 ALG6Q9Y672 507 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 IQGAP1P46940 1657 aa16.28■□□□□ 0.2
PCDHA4-203ENST00000530339 GOLGA8RI6L899 631 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 M0QYV0 167 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 CRYMQ14894 314 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 MAPRE2Q15555 327 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 TEX2Q8IWB9 1127 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 AGLP35573 1532 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 ASB14A6NK59 587 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 EFTUD2Q15029 972 aaKnown RBP eCLIP16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 EFHC2Q5JST6 749 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 ZNF677Q86XU0 584 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 ELMOD1Q8N336 334 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 RNF181Q9P0P0 153 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 SNX5Q9Y5X3 404 aa16.27■□□□□ 0.2
PCDHA4-203ENST00000530339 YWHAHQ04917 246 aaPredicted RBP16.27■□□□□ 0.19
PCDHA4-203ENST00000530339 MFSD14CQ5VZR4 134 aa16.27■□□□□ 0.19
PCDHA4-203ENST00000530339 SWSAP1Q6NVH7 229 aa16.27■□□□□ 0.19
PCDHA4-203ENST00000530339 CYFIP1Q7L576 1253 aa16.27■□□□□ 0.19
PCDHA4-203ENST00000530339 TTC8Q8TAM2 541 aa16.27■□□□□ 0.19
PCDHA4-203ENST00000530339 MDM1Q8TC05 714 aa16.27■□□□□ 0.19
PCDHA4-203ENST00000530339 REEP2Q9BRK0 252 aa16.27■□□□□ 0.19
PCDHA4-203ENST00000530339 POLR3CQ9BUI4 534 aaPredicted RBP16.27■□□□□ 0.19
PCDHA4-203ENST00000530339 MOV10L1Q9BXT6 1211 aaKnown RBP16.27■□□□□ 0.19
PCDHA4-203ENST00000530339 KIF9Q9HAQ2 790 aa16.27■□□□□ 0.19
PCDHA4-203ENST00000530339 FLT1P17948 1338 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms