RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 MAN2A1Q16706 1144 aa14.78□□□□□ -0.04
SMCO4-205ENST00000529714 NOMO2Q5JPE7 1267 aa14.78□□□□□ -0.04
SMCO4-205ENST00000529714 JADE1Q6IE81 842 aa14.78□□□□□ -0.04
SMCO4-205ENST00000529714 RNF214Q8ND24 703 aa14.78□□□□□ -0.04
SMCO4-205ENST00000529714 HELQQ8TDG4 1101 aa14.78□□□□□ -0.04
SMCO4-205ENST00000529714 CACTINQ8WUQ7 758 aaKnown RBP14.78□□□□□ -0.04
SMCO4-205ENST00000529714 SLC35C1Q96A29 364 aa14.78□□□□□ -0.04
SMCO4-205ENST00000529714 ZNF689Q96CS4 500 aaPredicted RBP14.78□□□□□ -0.04
SMCO4-205ENST00000529714 FAM212AQ96EL1 285 aa14.78□□□□□ -0.04
SMCO4-205ENST00000529714 RNPC3Q96LT9 517 aaKnown RBP14.78□□□□□ -0.04
SMCO4-205ENST00000529714 ZFP42Q96MM3 310 aa14.78□□□□□ -0.04
SMCO4-205ENST00000529714 ZMAT2Q96NC0 199 aaKnown RBP14.78□□□□□ -0.04
SMCO4-205ENST00000529714 PPP1R10Q96QC0 940 aaKnown RBP14.78□□□□□ -0.04
SMCO4-205ENST00000529714 RC3H2Q9HBD1 1191 aaKnown RBP14.78□□□□□ -0.04
SMCO4-205ENST00000529714 INTS13Q9NVM9 706 aa14.78□□□□□ -0.04
SMCO4-205ENST00000529714 LIMA1Q9UHB6 759 aaKnown RBP14.78□□□□□ -0.04
SMCO4-205ENST00000529714 UBQLN1Q9UMX0 589 aaKnown RBP14.78□□□□□ -0.04
SMCO4-205ENST00000529714 PDE4DIPQ5VU43 2346 aa14.77□□□□□ -0.04
SMCO4-205ENST00000529714 UPP2O95045 317 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 THP07101 528 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 NFICP08651 508 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 ATP2A2P16615 1042 aaKnown RBP14.77□□□□□ -0.05
SMCO4-205ENST00000529714 TNNI1P19237 187 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 CYP3A5P20815 502 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 CDK11BP21127 795 aaKnown RBP14.77□□□□□ -0.05
SMCO4-205ENST00000529714 IBSPP21815 317 aaPredicted RBP14.77□□□□□ -0.05
SMCO4-205ENST00000529714 SCNN1GP51170 649 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 DLG4P78352 724 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 HTRA4P83105 476 aaPredicted RBP14.77□□□□□ -0.05
SMCO4-205ENST00000529714 SHHQ15465 462 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 DUOXA2Q1HG44 320 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 HSP90AA4PQ58FG1 418 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 C9orf50Q5SZB4 431 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 C1orf220Q5T0J3 134 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 HERC6Q8IVU3 1022 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 EFCAB13Q8IY85 973 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 CMTR2Q8IYT2 770 aaKnown RBP14.77□□□□□ -0.05
SMCO4-205ENST00000529714 KIF12Q96FN5 646 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 CASD1Q96PB1 797 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 TUBGCP2Q9BSJ2 902 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 RBSNQ9H1K0 784 aa14.77□□□□□ -0.05
SMCO4-205ENST00000529714 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.77□□□□□ -0.05
SMCO4-205ENST00000529714 PTPRJQ12913 1337 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 PMM2O15305 246 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 N4BP1O75113 896 aaKnown RBP14.76□□□□□ -0.05
SMCO4-205ENST00000529714 TPM2P07951 284 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 TMEM191BP0C7N4 346 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 TRIM49P0CI25 452 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 TRIM49CP0CI26 452 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 ATP1A3P13637 1013 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 AFF1P51825 1210 aaKnown RBP14.76□□□□□ -0.05
SMCO4-205ENST00000529714 TFAMQ00059 246 aaKnown RBP14.76□□□□□ -0.05
SMCO4-205ENST00000529714 KRT31Q15323 416 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 NAB2Q15742 525 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 DCAF17Q5H9S7 520 aaPredicted RBP14.76□□□□□ -0.05
SMCO4-205ENST00000529714 GLRA4Q5JXX5 417 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 TCERG1LQ5VWI1 586 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 LRRC43Q8N309 656 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 BEST2Q8NFU1 509 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 ANKRD36BP1Q96IX9 119 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 CXCL16Q9H2A7 254 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 TMEM8AQ9HCN3 771 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 TBC1D13Q9NVG8 400 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 PLAGL2Q9UPG8 496 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 INPP5FQ9Y2H2 1132 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 INSL6Q9Y581 213 aa14.76□□□□□ -0.05
SMCO4-205ENST00000529714 CARNS1A5YM72 827 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 TBKBP1A7MCY6 615 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 P4HA2O15460 535 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 TNNC2P02585 160 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 AFPP02771 609 aaKnown RBP14.75□□□□□ -0.05
SMCO4-205ENST00000529714 GATMP50440 423 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 PPP3CAQ08209 521 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 DSC1Q08554 894 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 KCNH2Q12809 1159 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 TUSC3Q13454 348 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 UVSSAQ2YD98 709 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 ZACNQ401N2 412 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 VWA3BQ502W6 1294 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 C15orf39Q6ZRI6 1047 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 APTXQ7Z2E3 356 aaKnown RBP14.75□□□□□ -0.05
SMCO4-205ENST00000529714 CREBRFQ8IUR6 639 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 ZNF516Q92618 1163 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 UROC1Q96N76 676 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 YME1L1Q96TA2 773 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 POP1Q99575 1024 aaKnown RBP14.75□□□□□ -0.05
SMCO4-205ENST00000529714 RAD9AQ99638 391 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 MTMR12Q9C0I1 747 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 MIOSQ9NXC5 875 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 ITGA11Q9UKX5 1188 aa14.75□□□□□ -0.05
SMCO4-205ENST00000529714 GTPBP10A4D1E9 387 aaKnown RBP14.74□□□□□ -0.05
SMCO4-205ENST00000529714 POMCP01189 267 aa14.74□□□□□ -0.05
SMCO4-205ENST00000529714 C4BPAP04003 597 aaKnown RBP14.74□□□□□ -0.05
SMCO4-205ENST00000529714 LRPAP1P30533 357 aa14.74□□□□□ -0.05
SMCO4-205ENST00000529714 RPL9P32969 192 aaKnown RBP14.74□□□□□ -0.05
SMCO4-205ENST00000529714 GCLMP48507 274 aa14.74□□□□□ -0.05
SMCO4-205ENST00000529714 FMO5P49326 533 aa14.74□□□□□ -0.05
SMCO4-205ENST00000529714 MXI1P50539 228 aa14.74□□□□□ -0.05
SMCO4-205ENST00000529714 COPB1P53618 953 aaKnown RBP14.74□□□□□ -0.05
SMCO4-205ENST00000529714 RNASELQ05823 741 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms